Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02109 ATGTTTGACTCGAACTTTTCCACTATTATGTATCTTCCTGACAAGTTTAAACCTGCTGTAGCTGCCTCCGTTAATAAGAAAATCATTCTTGATGACAAAAGTGGGGAGAGATGGAAAGTAACTTTATCCGAAGCCGGTAGTCACTTGGCTTTCAAGGAAGGATGGAATAAGTTTTCGTCGGACCATGGACTTGAACGTGGAGATATTCTGGTATTCCATCATGTTACTGATGTGCACTTTTATGTTACAATCTATGATAAATATGCTTGTGAAAAGCTTTGTTGTTCGAATACGAGAAATAAGACAAAACGTAGAAGGGACAGTAGTGTCTCTCCAGTTAGAGATGTCATGTTGGCTACACCAGATCAAAATGCGTCGGTTGTTTCTGAGCCAGATGCTAAAAAGACAAATAGTCAGAACAAAGTGGTTGGTGTAGGAGGAACACCAAATAATGTAGAGAATATTTCAAAACATGATAAGAGCAATGGAAGTGTCAAATCTACGAGAATGACAGAAAACTATGACAACACTGCGAAAATTACAGCCAGAGAATCAAGAGTTTCTCCTGTCAACTACAAATTGTGCATGAATCCAGTCGATGCAATTCTATGCGACAACTCTCCTTCATTTGAAGAGAGATTCAGAGGAGCTGCTGCATTTTTGTCAGAAGCTGAACTATCTGGAAAAAGGGATTCTATTAGAAATACTGACAGAAGCAGATACGACAATACTTCTACTTGCAAACTTGGAGAAAGAAAAGAGAAGAATGTTTTGAAAAGGGAAGTTAGAGAGTTCCAATATACTGAGGACTTAGAAGGTGATAATAAGGTGGCAATGTCCAAGAAAGAACATGGCTTTCATATTGATGGATGTCTCAACACCAAACCAATGTTTAATGCCACACCGAATATCTCAGATGCTACTCGACTCAAAAGTGATCCTATGGCAACGTCCAAGGGAAAACATGGATTGCAAATTGATGGATGCCCCAATACCAAACATATTGTCAATAATGGCATACCAAGGGTCTCAAGTGCTATTCAAAACGGCAAAATCTTAAAAAAGATTAAGAGCGAGCAGGCAGACAGGAATCCCAGTGAGGAGTGCACTTTTAAGGACAAAGTGTGTGCAAAAGGTGAAATGCCCAAAAGGATTAAAAAAGAGCCGCGTATGGATATGACTTACAACGTGTCCAGATTCAAGGATGAATTCGAAGCCAGAGGTATTGAAGTTCCCAAAGGCTTGCCAAAGGTTATCAAGAAAGAGTTTGAGAAGAGTTCACACAAGACTGAACAAAATGATGATAACGATGATGACAGTGATAACATTCAATTGGCAGAAGTTGTGCGCTGCGTGGTGCCCGATCATAATGATAAATTTCTTGAATTGCCTACAAACTTGCATCAGTGCCGGAACTACAAAAATAACAGGATGGTGGTGATCCTGCGAGATCCGCAGAGGAGACTATGGCCGGTTCTTTACCATGATCTTCATGATAAAAAAATGCATGGTACAAAAGCCTTTTATCTGATAAAAGGGTGGTCACAATTTTACAGAGCCAATAATGTTCAACCAGGAGATTTGTGTACTTTTGAACTTAAGGAGGAGGCTAAACACATCTTCAATGTAGATATAAACCACAATTAA 1647 0.3934 MFDSNFSTIMYLPDKFKPAVAASVNKKIILDDKSGERWKVTLSEAGSHLAFKEGWNKFSSDHGLERGDILVFHHVTDVHFYVTIYDKYACEKLCCSNTRNKTKRRRDSSVSPVRDVMLATPDQNASVVSEPDAKKTNSQNKVVGVGGTPNNVENISKHDKSNGSVKSTRMTENYDNTAKITARESRVSPVNYKLCMNPVDAILCDNSPSFEERFRGAAAFLSEAELSGKRDSIRNTDRSRYDNTSTCKLGERKEKNVLKREVREFQYTEDLEGDNKVAMSKKEHGFHIDGCLNTKPMFNATPNISDATRLKSDPMATSKGKHGLQIDGCPNTKHIVNNGIPRVSSAIQNGKILKKIKSEQADRNPSEECTFKDKVCAKGEMPKRIKKEPRMDMTYNVSRFKDEFEARGIEVPKGLPKVIKKEFEKSSHKTEQNDDNDDDSDNIQLAEVVRCVVPDHNDKFLELPTNLHQCRNYKNNRMVVILRDPQRRLWPVLYHDLHDKKMHGTKAFYLIKGWSQFYRANNVQPGDLCTFELKEEAKHIFNVDINHN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02109 548 SMART B3_2 448 544 IPR003340 GO:0003677
Adu03g02109 548 SMART B3_2 2 88 IPR003340 GO:0003677
Adu03g02109 548 MobiDBLite consensus disorder prediction 123 158 - -
Adu03g02109 548 CDD B3_DNA 3 86 IPR003340 GO:0003677
Adu03g02109 548 Pfam B3 DNA binding domain 462 537 IPR003340 GO:0003677
Adu03g02109 548 Pfam B3 DNA binding domain 6 87 IPR003340 GO:0003677
Adu03g02109 548 Gene3D - 1 90 IPR015300 -
Adu03g02109 548 Gene3D - 444 548 IPR015300 -
Adu03g02109 548 MobiDBLite consensus disorder prediction 123 168 - -
Adu03g02109 548 CDD B3_DNA 457 545 IPR003340 GO:0003677
Adu03g02109 548 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 545 IPR044837 -
Adu03g02109 548 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0905400-LIKE ISOFORM X1 5 545 - -
Adu03g02109 548 SUPERFAMILY DNA-binding pseudobarrel domain 2 90 IPR015300 -
Adu03g02109 548 ProSiteProfiles B3 DNA-binding domain profile. 1 88 IPR003340 GO:0003677
Adu03g02109 548 SUPERFAMILY DNA-binding pseudobarrel domain 451 538 IPR015300 -
Adu03g02109 548 ProSiteProfiles B3 DNA-binding domain profile. 446 548 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02109 9 91 B3 DNA Binding Superfamily AT4G01580 27.711 1.03e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu03g02109 B3 1.7e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02109 - - adu:107478866 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02109 03 41660562 41664846 Adu03g02109 03 41660562 41664846 ECH