Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02106 ATGGTGGAAGAGTCCATAGCGGTCCAAGTCCATTCACCCATACATCCGAACCAGGGATATGCAGATGAAAGAATTCTCAAACCGGAACAAGAGCATGTCCATGAAGTGCATTGCTCTAGAGAAAGGAGCAGGGCAGCTAGGAAAGTAATTGAGGAGTATTTGACACCATTTTTGGAGCAAGAAAACTATCAGCTTTCAAGCAAGTGCAGACTTCACCCTGAAAATGACATGTTTAGGGATCAAGAAGAGCATAAAATTTGCCTAGGCTTTCATGACTGGAAGTGCGGATATTGTAAGAAAAGCTTCCGAGATGAGAAGTTTCTTGATCAGCATTTTGATAACAGACACTCCAATCTTCTCAATTTAagtgatgggaagtgcttggctgatttatgtggggcattgcattgcgatgctgtgatgaacaggaagttctctagaagcaagtgtaatccagctgctgccacgaggaataaacacctatgtgagagtcttgctgagagttgttttcctgtaagtgatggtccatctgcaagtcgtcttcacgaaatatttttacaccaattttgtgaggcccatacctgctcagggaaacagaaacccttctctagaggaggtaaggtacaaaaaagtatcttcgttgtggtttctggagcattgatcttggtgctacttcctttgttctatcttttcctttatctggtacaaagagatatgaagaccatcatgaTTGGTTTGACACTTAAACAGTTGCAATCATAA 762 0.2139 MVEESIAVQVHSPIHPNQGYADERILKPEQEHVHEVHCSRERSRAARKVIEEYLTPFLEQENYQLSSKCRLHPENDMFRDQEEHKICLGFHDWKCGYCKKSFRDEKFLDQHFDNRHSNLLNLSDGKCLADLCGALHCDAVMNRKFSRSKCNPAAATRNKHLCESLAESCFPVSDGPSASRLHEIFLHQFCEAHTCSGKQKPFSRGGKVQKSIFVVVSGALILVLLPLFYLFLYLVQRDMKTIMIGLTLKQLQS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02106 253 PANTHER ZINC FINGER PROTEIN-RELATED 16 243 - -
Adu03g02106 253 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 243 - -
Adu03g02106 253 SUPERFAMILY Expressed protein At2g23090/F21P24.15 89 118 - -
Adu03g02106 253 ProSitePatterns Zinc finger C2H2 type domain signature. 95 116 IPR013087 -
Adu03g02106 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 118 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02106 Adu-Chr3 41638594 41641073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02106 17 241 C2H2 Transcription Factor Family AT5G63280 59.130 2.09e-93 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g02106 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02106 - - lang:109362398 353.984