Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02104 ATGGGGGCGGCGGAGACGGAGTTGTTAACGGCGGCGGAGCAGCCACGAAAGGCACCGCGGCCAGGTAAAGGAGGATACTCAGGTCACGGCCTGAGCGAAGAAGAAGCGCGCGTGCGCGCAATCTCTGAGATCGTGAGTTCCATGGTTGAGCTCTCGCGTAAGGGACAGAACGTCGACCTCAACGCGCTCAAGTCTAGCGCGTGTCGCAAGTATGGCCTCGCACGCGCTCCGAAGCTCGTGGAGATGATTGCTGCACTCCCTGACTCCGAGCGCGATGCGCTCCTCCCTAAGCTTAGGGCGAAACCGGTTCGAACCGCCTCTGGAATCGCGGTGGTGGCGGTTATGTCGAAGCCGCATCGGTGCCCGCACATCGCGACCACCGGAAACATATGCGTTTACTGTCCCGGAGGACCTGACTCGGATTTTGAGTACAGTACTCAGTCTTACACTGGTTATGAACCGACTAGTATGCGTGCAATTCGAGCGAGGTATAACCCATATGTCCAAGCAAGAAGCAGGATAGATCAGCTTAAGCGTTTGGGTCACAGTGTAGACAAGGTTGAGTTCATTTTAATGGGTGGTACTTTCATGTNNNNNTACTTCATAAGGAATCTTCATGATGCTTTGTCTGGACATACTTCTGCCAATGTAGAAGAAGCGGTTGCATACTCTGAGCACAGTGCAACTAAGTGTATCGGCATGACAATTGAGACAAGGCCAGATTATTGTCTTGGGCCTCACTTGCGGCAAATGCTTTCCTATGGTTGTACACGGTTGGAAATTGGAGTCCAAAGCACCTATGAGGATGTTGCTCGAGACACTAACAGAGGGCATACAGTAGCTGCTGTGGCTGATTGTTTTTCCTTGGCAAAAGATGCTGGTTTCAAGGTTGTTGCTCACATGATGCCTGATCTTCCTAATGTTGGTGTTGAAAGGGACATGGAAAGTTTCCGGGAGTTTTTTGAGAGCCCCTCATTTAGAGCAGATGGGCTTAAAATATATCCTACACTTGTAATACGTGGAACTGGACTTTATGAGCTCTGGAAAACTGGGAGGTATAGAAATTATCCACCTGAGCAACTTGTGGATATCATAGCTAGGATTCTTGCTATGGTGCCACCTTGGACACGTGTTTATAGAGTTCAACGGGATATTCCCATGCCTCTGGTTACATCTGGGGTTGAGAAAGGAAATCTGAGAGAGCTAGCATTAGCTCGAATGGAAGACCTGGGATTGAAATGTCGTGACGTTCGGACCAGAGAAGCTGGAATCCAGGATATTCACCACCAAATTAGTCCCTCTAATTTTATTGCTGGCATCCTTACGTCATACACCACACATTCGAGTGATATCCTTGTTGGTCTTCTACGACTGCGAAAATGTGGCCGAAACGTTACTTGCCCAGAGCTAATGGGCAAGTGTTCTATTGTTCGTGAACTTCATGTTTATGGAACTGCTGTACCAGTTCATGGGAGGGATGCTGACAAGCTACAACACCAGGGTTATGGTACGCTTCTAATGGAGGAGGCAGAGCGTATTGCTTTAAGAGAACACCGATCAACAAAAATAGCTGTAATTTCAGGGGTTGGCACCCGCCATTATTACAGGAAACTGGGATATGAGCTTGAAGGGCCTTACATGGTTAAATATCTAGTATAA 1659 0.484 MGAAETELLTAAEQPRKAPRPGKGGYSGHGLSEEEARVRAISEIVSSMVELSRKGQNVDLNALKSSACRKYGLARAPKLVEMIAALPDSERDALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMXXYFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQISPSNFIAGILTSYTTHSSDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIALREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02104 552 ProSiteProfiles Radical SAM core domain profile. 104 388 IPR007197 GO:0003824|GO:0051536
Adu03g02104 552 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 397 552 IPR000182 GO:0016407
Adu03g02104 552 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 13 551 IPR039661 -
Adu03g02104 552 SUPERFAMILY Radical SAM enzymes 141 374 - -
Adu03g02104 552 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 303 547 IPR016181 -
Adu03g02104 552 Pfam Radical SAM superfamily 129 311 IPR007197 GO:0003824|GO:0051536
Adu03g02104 552 SFLD ELP3-like 59 551 IPR034687 -
Adu03g02104 552 PIRSF HAT_Elp3 26 552 IPR034687 -
Adu03g02104 552 SFLD elongater protein-like 59 551 - -
Adu03g02104 552 CDD Radical_SAM 118 359 - -
Adu03g02104 552 Gene3D - 416 550 - -
Adu03g02104 552 MobiDBLite consensus disorder prediction 1 31 - -
Adu03g02104 552 PANTHER ELONGATOR COMPLEX PROTEIN 3 13 551 IPR034687 -
Adu03g02104 552 Pfam Radical_SAM C-terminal domain 329 408 IPR032432 -
Adu03g02104 552 TIGRFAM ELP3: radical SAM enzyme/protein acetyltransferase, ELP3 family 56 551 IPR034687 -
Adu03g02104 552 SMART MiaB 111 367 IPR006638 GO:0003824|GO:0051536
Adu03g02104 552 Pfam Acetyltransferase (GNAT) family 450 540 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Adu03g02104 Radical_SAM 3.1e-17 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02104 K07739 - gmx:100818764 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02104 03 41631838 41635364 Adu03g02104 03 41631838 41635364 ECH