LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g02090	ATGGCTTCAGAGGCCGCGGTGGTCGGGGCAACAGGGCTGCGGTGGGCATCGCAGGGGCGGTGGATGCCGCAAGGAAGAGGAGAAGTAGGTTCCAGTGACGAAGCTGGGTCGCCTCATGAAAGGGGGAAAAAACAAACACGTGCCGGTCAAAAACCCCGTTTCAAGCCCTTCGTCGTTGTCGGTGATACCAACGGTCACGTCAGACTCGGTGTTAAGTGCAGCAAGGAGATGGCAACTGCCATTTGCAGTGCCATTATATTGGCAAAACTTTCGGTGATTCCTGTGAGGAGAGGTTATTGGGGTAACAAGATTGGAAAGCCACACACCGTTCTCTGCAAGGTCACCGAAAATTGTGGTTCCGTCACTGTCCGTATGGTGCCTGCTCCTCGTGGTTTTAGAATTGTTGCTGTTAGGGTTCCAAGAAGGTCTTGCAATTTGCAGGGATTGATGATGTATTTACTTCTTCTAGAGGATCCACCATTTCTTTGGAAATTTCACACTGATCTACTTGCCAAGCCAACAGCCAAGGCTCTCTCATCTTGGAGGATGAAAGGGTCGAGCTTAATCTTTACCATTTCTTGGCATTTAT	589	0.4992	MASEAAVVGATGLRWASQGRWMPQGRGEVGSSDEAGSPHERGKKQTRAGQKPRFKPFVVVGDTNGHVRLGVKCSKEMATAICSAIILAKLSVIPVRRGYWGNKIGKPHTVLCKVTENCGSVTVRMVPAPRGFRIVAVRVPRRSCNLQGLMMYLLLLEDPPFLWKFHTDLLAKPTAKALSSWRMKGSSLIFTISWHL	196

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g02090	196	ProSiteProfiles	S5 double stranded RNA-binding domain profile.	32	95	IPR013810	GO:0003723\|GO:0003735\|GO:0005840\|GO:0006412
	Adu03g02090	196	PANTHER	BNAA03G19630D PROTEIN	43	148	-	-
	Adu03g02090	196	SUPERFAMILY	Ribosomal protein S5 domain 2-like	108	149	IPR020568	-
	Adu03g02090	196	MobiDBLite	consensus disorder prediction	19	53	-	-
	Adu03g02090	196	MobiDBLite	consensus disorder prediction	33	47	-	-
	Adu03g02090	196	PANTHER	RIBOSOMAL S SUBUNIT	43	148	IPR000851	GO:0003723\|GO:0003735\|GO:0005840\|GO:0006412
	Adu03g02090	196	Gene3D	-	29	94	-	-
	Adu03g02090	196	Gene3D	-	95	153	IPR014721	-
	Adu03g02090	196	SUPERFAMILY	dsRNA-binding domain-like	43	97	-	-
	Adu03g02090	196	Pfam	Ribosomal protein S5, N-terminal domain	42	96	IPR013810	GO:0003723\|GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g02090	Adu-Chr3	41490323	41491029	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g02090	43	149	Cytoplasmic Ribosomal Protein Gene Family	AT1G58983	77.570	1.65e-52	168

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g02090	K02981		-	gmx:100797105	170.629