Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02084 ATGGCAGCTGGGAGAGGCGGTGTTTTGAAGAGGGGGGAATCTTACAAATATGGCTCCATTAAGGAATTTGACTGCAAATATAATAATGATGGTTCTTCTATGGTGGAAGCTTCACCTGCCTCTAGTTCTCATGGTGGTGAAGCTTTGCTTCGGGCAGAGAAGAGGAGGAAAGTTTCTCCTAATGCATGGGACATGGGAGAGAGCGAAGTGAGAGTTTCTTCGAAAAACAGGGTCACCCAGGTTGTGGGTCTGCCTCCTACTACTCCATCTCCGGCTGATTCGTCTTTCGTGCTGCCTGGAGAGCAGTCAGGTGATGGTGATACAGATGCGGATTGCTTCGAGGGAAACAAGGTGCAGGGATGGAACATTGCAATGTCGAGGTGGGCTTCTGCTGATTTTTCACCAGTTGATGCATCTTATGATGAGGACAAGGATGGTAAAGTGAGCTTAACAACTGAAAGTGGTGAGATCCTAGAAGGAAGCTCGGGTGGGAAAGTTAGTAGATCAACTGGGAGTAGTGAAAGAGGTAAGTCTGACCTTTCTTCTGATGATGATACTGACACTGAAGAGGATAATATTGTTGATTCCATTGAGGAGGAGGATGAGGAACAAGGTAAAACTGCTTATAGTTTGGTGTCGGATTCTGATGAAAATCTTGGAGGTTGCAGGAAGGTGGAGAGGAATATAAACATGCTCAACAGCTGCAGAAGTGTGTTTGAGTTTGAAATGATTAAGAAGATAAATGAAGGAACTTATGGCGTTGTCTACAAAGCTAAGGATAAGAAGACCGGGGAAATAGTTGCATTGAAGAAGGTGAAGATGAACATAGATAAGGAAGGCTTTCCTTTGACATCCTTGAGGGAAATGAACATTCTTTTGTCCTTTAATCACCCGTCCATTGTAGATGTTAAAGAAGTAGTAGTTGATGATTTTGATGGTGTTTTTATGGTAATGGAGTATATGGAGCACGACCTTAAGGGGCTGATGGATGATATGAAGCAGCCTTTTAGTATAGGTGAAATAAAATCGTTGATGTGGCAACTTCTTCAAGGTGTTGACTATCTTCACGATAATTGGGTTCTTCACAGAGATTTGAAGTCTTCAAACATTCTGCTGAACAACAAAGGAGAACTGAAAATATGTGATTTTGGATTGTCTCGCCAGTATGGGAGCCCACTGAAGCCGTATACGCCTCTTGTGGTTACTCTACGTTACAGAGCACCTGAGCTTTTGTTAGGTTCTAAAGAATACTCCACAGCAATTGACATGTGGTCTGTTGGTTGCATAATGGCTGAATTAGTTGCCAGAGAGCCTCTTTTCAAGGGTAAAAATGAAGTTGAACAACTTGATCAGATTTTTCGAACTCTGGGTACCCCAGATGAGAATATTTGGCCCGGATTATCCAAATTGCCTGGGTCTAAAGCAAAATTTGTGAGGCAACCGTATAATATGCTCTGGAAGAAGTTCCCAGTCGCATCTTTTACTGGTCAGCCAGTTTTATCAGAGTCAGGATTTGACTTGTTGAGCAGGCTTCTAACTTATGACCCTGAAAAGAGGATAACAGCTAAAGATGCTCTCCTTCATGATTGGTTCCATGAAGCCCCTCTTTCTAATTCTGATTTCAAGCCTATTTCCCCTTTTCGTTGCTAG 1650 0.4279 MAAGRGGVLKRGESYKYGSIKEFDCKYNNDGSSMVEASPASSSHGGEALLRAEKRRKVSPNAWDMGESEVRVSSKNRVTQVVGLPPTTPSPADSSFVLPGEQSGDGDTDADCFEGNKVQGWNIAMSRWASADFSPVDASYDEDKDGKVSLTTESGEILEGSSGGKVSRSTGSSERGKSDLSSDDDTDTEEDNIVDSIEEEDEEQGKTAYSLVSDSDENLGGCRKVERNINMLNSCRSVFEFEMIKKINEGTYGVVYKAKDKKTGEIVALKKVKMNIDKEGFPLTSLREMNILLSFNHPSIVDVKEVVVDDFDGVFMVMEYMEHDLKGLMDDMKQPFSIGEIKSLMWQLLQGVDYLHDNWVLHRDLKSSNILLNNKGELKICDFGLSRQYGSPLKPYTPLVVTLRYRAPELLLGSKEYSTAIDMWSVGCIMAELVAREPLFKGKNEVEQLDQIFRTLGTPDENIWPGLSKLPGSKAKFVRQPYNMLWKKFPVASFTGQPVLSESGFDLLSRLLTYDPEKRITAKDALLHDWFHEAPLSNSDFKPISPFRC 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02084 549 Pfam Protein kinase domain 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02084 549 Gene3D Transferase(Phosphotransferase) domain 1 323 543 - -
Adu03g02084 549 SUPERFAMILY Protein kinase-like (PK-like) 237 535 IPR011009 -
Adu03g02084 549 MobiDBLite consensus disorder prediction 151 190 - -
Adu03g02084 549 Gene3D Phosphorylase Kinase; domain 1 224 322 - -
Adu03g02084 549 MobiDBLite consensus disorder prediction 154 176 - -
Adu03g02084 549 CDD STKc_CDC2L1 235 531 IPR045267 GO:0004674|GO:0005524|GO:0006468
Adu03g02084 549 ProSiteProfiles Protein kinase domain profile. 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02084 549 MobiDBLite consensus disorder prediction 59 108 - -
Adu03g02084 549 PANTHER CELL DIVISION PROTEIN KINASE 72 546 - -
Adu03g02084 549 PANTHER CYCLIN-DEPENDENT KINASE 72 546 - -
Adu03g02084 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Adu03g02084 549 SMART serkin_6 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02084 549 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02084 Adu-Chr3 41398171 41401424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02084 236 536 Core Cell Cycle Gene Families AT5G10270 45.483 5.81e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Adu03g02084 Pkinase 3.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02084 K08818 - gmx:100788840 636.721