Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02082 ATGAGTGCTGCCGATATGTTTCTCTTGGTCTTTTATATATGTTACTTGTTGCTCTATGCCCTTCTAAATCAGGAAAATGTCAACACAAGACATCCTCAGTTGCTGTATGAGTCCAAGTTGTACAGGATTCTCCAGGGAGGAACTGGTATTCCTAATATCAAATGGTTTGGAGTAGAGGGAGAATACAATGTTCTAGTGATGGATCTCCTTGGACCTAGTCTAGAAGATCTATTCAACTTCTGTAGTAGAAAGCTCTCGCTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTATTCATTCTAAATCATTTCTACATCGGGATCTCAAACCAGATAATTTCCTCATGGGATTGGGAAGGCGGGCTAACCAGGTTTACTGTATTGATTTTGGATTGGCAAAGAAATACAGAGATAGTACAACTCACCAACACATTCCTTACAGGGAAAATAAGAATTTGACCGGAACAGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAATCTCTTGGTTTTGTCTTGATGTACTTCCTGAGAGGAAGTCTCCCTTGGCAAGGACTTAGAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAAGTCACTACCTCAATAGAGGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCTTTAAGGTTTGATGATAGGCCAGATTATGCTTACCTGAAGAGAATATTCCGTGACCTGTTTATTCGTGAAGGATTTCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAACTAGCCACTCCACCAGCGCGTGCTTCTGCTCCTAATGCTGGAACTAGTTCTGGAATGCCTCCGCCTGTGACCAACGCTGCTGATAGGCAGACAGGAGGGGAAGAAGGAAGACCCCCTGGCCTGGTTTCTGTGGATTCAAGGCGAATAATATCAGGGCCCATTTTAAATTCTGTAACTTCTTTAAAGCAGAAAAATGCGGTCATCCCTGATTCTGCTGTTAGTAAGGATGCTATGTTATCTAGCACCAATATCTTGGGCCAGTCAAGTGGATCAAGGCGAGTTGCTGCTGGCAGCCGTGAGACTTTTGCTGGTGTCGAATTGGATCCTCGTACGCGTATGGCAGAGGCTAGCCCCGGAGCAGCAAACAGAGTTTCAAGTGTGCGAAAAAGTTCACCTATTAGGTCTTTAGACCCCAAGAAAGTAGTATCATCAGCTAAAGGTGCTTCCCATGTCAAGAATTATGAAAGTACAGTTAAGGGTATGGAGCGTTTGCAGTTAGAAGATGATGAGAGGGCCCCTTAA 1374 0.4301 MSAADMFLLVFYICYLLLYALLNQENVNTRHPQLLYESKLYRILQGGTGIPNIKWFGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDLKPDNFLMGLGRRANQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLRAGTKKQKYEKISEKKVTTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARASAPNAGTSSGMPPPVTNAADRQTGGEEGRPPGLVSVDSRRIISGPILNSVTSLKQKNAVIPDSAVSKDAMLSSTNILGQSSGSRRVAAGSRETFAGVELDPRTRMAEASPGAANRVSSVRKSSPIRSLDPKKVVSSAKGASHVKNYESTVKGMERLQLEDDERAP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02082 457 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02082 457 PANTHER CASEIN KINASE I-LIKE 24 439 - -
Adu03g02082 457 Gene3D Transferase(Phosphotransferase) domain 1 20 302 - -
Adu03g02082 457 Pfam Protein kinase domain 29 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02082 457 MobiDBLite consensus disorder prediction 289 327 - -
Adu03g02082 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Adu03g02082 457 MobiDBLite consensus disorder prediction 397 457 - -
Adu03g02082 457 PANTHER CASEIN KINASE-RELATED 24 439 - -
Adu03g02082 457 SUPERFAMILY Protein kinase-like (PK-like) 29 275 IPR011009 -
Adu03g02082 457 MobiDBLite consensus disorder prediction 289 308 - -
Adu03g02082 457 SMART serkin_6 12 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02082 Adu-Chr3 41314272 41318724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02082 85 267 MAP Kinase Kinase Kinase AT1G62400 29.189 2.34e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Adu03g02082 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02082 K02218 - gmx:100811567 692.96