Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02079 ATGTCAGTGCTTGTTAGTCTTCCTAATAGAGGAGTCAGAGCTTTCTGCAAAGGAGCATCAGAAATAATATTAAGAATATGTGACAAAATCATTGATTCTAATGGAAATGATGTTGATCTTCCTGAAGAACAGGCGAATAAAGTTAATGCTCTGAGAACTCTTTCTGTGGTTGTTAAAGATATAGATGCAACAGAAGGAGAAAATAATTCAAAGGCAGAAGTAATAGCTCCGTCACCAAAGTCGTTAATGGCAATGAACCGTTTCGTGTGTGAGATATGCAAGAAAGGGTTCCAGAGGGACCAGAACCTACAGTTGCACTGGCAAAGGCACAACCTGCCGTGGAAGCTTCGGCAGCGAGAGAAGGAGGTGGTGGTGCGGAAGAAGGTGGACGAGGGttga 399 0.4286 MSVLVSLPNRGVRAFCKGASEIILRICDKIIDSNGNDVDLPEEQANKVNALRTLSVVVKDIDATEGENNSKAEVIAPSPKSLMAMNRFVCEICKKGFQRDQNLQLHWQRHNLPWKLRQREKEVVVRKKVDEG 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02079 132 Gene3D - 1 87 IPR023299 GO:0000166
Adu03g02079 132 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 66 IPR023299 GO:0000166
Adu03g02079 132 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 65 129 - -
Adu03g02079 132 Gene3D Classic Zinc Finger 88 111 - -
Adu03g02079 132 SUPERFAMILY beta-beta-alpha zinc fingers 87 111 IPR036236 -
Adu03g02079 132 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 65 129 - -
Adu03g02079 132 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Adu03g02079 132 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 110 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02079 Adu-Chr3 41258375 41259180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02079 66 129 IDZ Gene Family AT3G13810 70.312 1.27e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g02079 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02079 K25870 - twl:119982308 89.3521