Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02075 ATGGAAGGTGTGTTCTTCCTGCCAGAAGTCGCCAGAACCGGTTATCTTCGCTCTATAGTGCAGTCTGTTGGCTGCGCCTACATTTGTCTCTGGTCCTTTGATCCCACTTCTTCTCCTAATAATCGGTTGTTCTTCTTGGATGGTTTCTACAATAACGTCAGAAACAACCAACAAGCAAGCTCTTCATTGGGGAGTGTGGCGCAACAACTCTTTAATCAGTTCAGGACTTTAAGATTTGATGCAAATGATGACCGTATTCCTGGACTAGCTTTTAGGAACAACCGTCCGTACGTAGAGGTGCAGCAACCGGAACTTCTCAGACTCGCATGGACTCAAATACAAAAACAATTCTTTCAGGAAGCAAGGATTAAGACTGCTGTATTCATGGGGTGCAACAAAGGGGAAATTGAGCTTGGTTTCTTAAATTTGTCTCAGGCTGAAATTCAAACAGCACTTAGCAGTTTGTTCCAGGAAGATTTCTCTTCTGGTCGGCAAATAATGGATCATCAGAATAATCCACCCTCATCATCTTCATCTTCTTTGAGATCATTATCCACAACAGCTGGCAGCCCTGAATACTCCTCACTCCTATTCAACATTCCTCCGGCCGGAGCTACCGCGGGAGCAATAGTACCTAACACAATGTCTCCTTTGTCATCTAACACACAATCAGCATTGCTAACTAATTACGTATTCCCGAGTCATCACCAGGAGATCGAAAACGAGACACTAATGAGAGTGTTCCTGAACGCTATATCACCACAACAGCATCAAAACTTGCCTTATAACATCACTGTGGTGCACCCTGAGAGTAGCGCTTTCAAGAGGTACAGGACGGAACCGGAACCGGGACCGGAACGGGCGCCGGAGAGTTTGCGGAGTAGGCAAAGCCTTATGAAGAGATCGTTAGCGTTCTTTAGGAGCATCAATGCTATGAGAATAAGGGAACGGATTCAAGCCACTCGCCCCTCTAGCACACAGCTTCATCATATGATAGCTGAGAGAAGAAGGCGCGAGAAGCTCAACGATAATTTTCAGGCTCTTAGAGCATTGCTTCCTCCCGGAACTAAGAAAGACAAAGCGTCTATACTAACAACTGCAAAGGAGACACTGAGTTCATTGATGGCGGAAATTGAAAAGCTGAGGATAAGAAATCACGAGTTAGAATCACGTTTGCCTGAAAGCAGCAAAGAATCAAGCGCTGCCGATCAAGAAATTAGCAAAACTATGTTATTGGTGCCACCAAACGAGAGATTTCATGTTCAAATTTCAGATGTGCCACAATCATCATCATCATCATCGTCAGAAGAGAGAAGGGTGGATTTGCATGTCGCTTTGAGGGGGCAAATTTCTCAGATTGATGCGGTGATTCGGTTATTGGAGTTCTTGAAACTGGCTCAGAATGTGAGCTTGATTACCATGAGAACAAATACCAATAATGTTGGTCAAGGGAATAATAATTATATTAATCAACTAACATTCAGATTAAGGATTCTTGAGGGAAGTGAATGGGATGTTTCTGCCTTCCAGGAAGCAGTGAAAAGAGTTGTAGGTGATTTGGCACAGTTCCAAGTTGACCATTAG 1584 0.4394 MEGVFFLPEVARTGYLRSIVQSVGCAYICLWSFDPTSSPNNRLFFLDGFYNNVRNNQQASSSLGSVAQQLFNQFRTLRFDANDDRIPGLAFRNNRPYVEVQQPELLRLAWTQIQKQFFQEARIKTAVFMGCNKGEIELGFLNLSQAEIQTALSSLFQEDFSSGRQIMDHQNNPPSSSSSSLRSLSTTAGSPEYSSLLFNIPPAGATAGAIVPNTMSPLSSNTQSALLTNYVFPSHHQEIENETLMRVFLNAISPQQHQNLPYNITVVHPESSAFKRYRTEPEPGPERAPESLRSRQSLMKRSLAFFRSINAMRIRERIQATRPSSTQLHHMIAERRRREKLNDNFQALRALLPPGTKKDKASILTTAKETLSSLMAEIEKLRIRNHELESRLPESSKESSAADQEISKTMLLVPPNERFHVQISDVPQSSSSSSSEERRVDLHVALRGQISQIDAVIRLLEFLKLAQNVSLITMRTNTNNVGQGNNNYINQLTFRLRILEGSEWDVSAFQEAVKRVVGDLAQFQVDH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02075 527 Gene3D - 324 399 IPR036638 GO:0046983
Adu03g02075 527 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 325 395 IPR036638 GO:0046983
Adu03g02075 527 SMART finulus 331 380 IPR011598 GO:0046983
Adu03g02075 527 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 520 IPR044658 -
Adu03g02075 527 Pfam Helix-loop-helix DNA-binding domain 329 374 IPR011598 GO:0046983
Adu03g02075 527 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED 1 520 - -
Adu03g02075 527 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 325 374 IPR011598 GO:0046983
Adu03g02075 527 Coils Coil 364 398 - -
Adu03g02075 527 MobiDBLite consensus disorder prediction 165 186 - -
Adu03g02075 527 CDD bHLH_AtbHLH_like 330 382 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02075 Adu-Chr3 40955664 40960610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02075 5 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 39.130 9.05e-102 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g02075 HLH 5.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02075 - - adu:107479037 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02075 03 40955664 40960610 Adu03g02075 03 40955664 40960610 ECH
Adu01g02059 01 87733830 87737174 Adu03g02075 03 40955664 40960610 PCT