Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02071 AGCATCACTTCTCAGCCTTGCACCGCCGCCGCACCAAACCTCCATTGCACCGAACTTCCATGCCCCGTCACACCCCTTCCCGGCTCTTCTATGTGTTGCTCGCGTCGTTCCCTTTCGAACCCTAATGTCGGCACTAACCATAACCAATGGCGTCCGCCGAGCAGCCATTGAAGAAGCGAAAGCACGACACTCTCCCGGAATCCCCACTGCCACACCACCGCCGCTAGCACTGCTGCCACAATCACCTCAAACCCTAGCTCGTCCGCCTACTCCTCCTCCTCCTCTGCCTCTGTCACAGGATGAGGTCGTCACCAAGCAGAGGAACAAAGATGAGGTTCGAACCATGTTTGAGAGCTACCATAGCATCAAGCTCTTCTTGTCAAAGAAGCAAGGTGATTTCCTCCATGACCTTGAACAGAGCTTCTTCGCTCTCGTAAATACTTCCAGAGTTTTTAGCTCCAGCATATCTAAAGAAGATGAAGCCCTCAATTTTCTTAGTACATATAACTATGTAATTTCATCTGATCAAGACCAAATGAAAGAAATAGAGCTATCTCTGATAGGACTCCAGAATGCTGGAAAGACTTCCCTTGTAAATGTTGTTGCTGAACCAATCACAAAACTTGCATCAATGGGGTACTGTTTTGGAAGGCTGAGTCAGAAGAGATTAGGAAGAAATGGTTTAAGGGAGTTGAGAATGGGTGTAATCCGTCTAGCTCGAGCTTATACCGGAAATGAGAAGATCATCAAATTTGAAGGATGTGCTACTTATGAAACTCTTACAGCCCCCTTCAATGACTTATCAGCTGTTGAGAAACTCTTTGAGGATAACAAGGGAGAGATAGCTGCAGAGAACAATTCCCTTCTAATCTTTGATGAGGTTATGACTGGATTCCATTTGGCATATAGTGGCGCTCAAGAATATTTTGGCATAACTCCTGATTTAACAACACTAGGAAAGATCATTGGTGGGGGTCTGCCTATAAGAGCTTATGGAGGGAGGAGGGATATTATGGAGATGGTGGCACCTGTTGGACTGATGTACCAAGCCGGGACCTTGAGTGGGAACCCTTTGGCTATGACTGCAGGTATAGAGACTCTGAAGCGCATTAAGGAGGCAGGAACTTATGAATATTTGGATAAAATTACAGGTGAGCTTGTTCGCGGCATCGTTGAAGCCGGGAAGAAGGCAGGCCATGCTATATGTGGTGGGCATATAAGTGGGATGTTCGGGTTTTTCTTCACAGAAGGACCTGTTTACAATTTTGCTATCTTCCATCCATTTTTTATGCATGTAATGAGATTGGAGCACAGATATCTTTCACATCGACACAACTTCTAA 1342 0.459 ASLLSLAPPPHQTSIAPNFHAPSHPFPALLCVARVVPFRTLMSALTITNGVRRAAIEEAKARHSPGIPTATPPPLALLPQSPQTLARPPTPPPPLPLSQDEVVTKQRNKDEVRTMFESYHSIKLFLSKKQGDFLHDLEQSFFALVNTSRVFSSSISKEDEALNFLSTYNYVISSDQDQMKEIELSLIGLQNAGKTSLVNVVAEPITKLASMGYCFGRLSQKRLGRNGLRELRMGVIRLARAYTGNEKIIKFEGCATYETLTAPFNDLSAVEKLFEDNKGEIAAENNSLLIFDEVMTGFHLAYSGAQEYFGITPDLTTLGKIIGGGLPIRAYGGRRDIMEMVAPVGLMYQAGTLSGNPLAMTAGIETLKRIKEAGTYEYLDKITGELVRGIVEAGKKAGHAICGGHISGMFGFFFTEGPVYNFAIFHPFFMHVMRLEHRYLSHRHNF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02071 446 Gene3D - 274 370 IPR015421 GO:0003824
Adu03g02071 446 Gene3D Aspartate Aminotransferase, domain 1 371 436 IPR015422 GO:0003824
Adu03g02071 446 Pfam Aminotransferase class-III 280 397 IPR005814 GO:0008483|GO:0030170
Adu03g02071 446 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 289 325 IPR005814 GO:0008483|GO:0030170
Adu03g02071 446 PANTHER BNAA09G06670D PROTEIN 229 255 - -
Adu03g02071 446 PANTHER BNAA09G06670D PROTEIN 255 283 - -
Adu03g02071 446 PANTHER BNAA09G06670D PROTEIN 283 423 - -
Adu03g02071 446 MobiDBLite consensus disorder prediction 60 100 - -
Adu03g02071 446 MobiDBLite consensus disorder prediction 67 98 - -
Adu03g02071 446 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 255 283 - -
Adu03g02071 446 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 283 423 - -
Adu03g02071 446 SUPERFAMILY PLP-dependent transferases 232 425 IPR015424 -
Adu03g02071 446 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 229 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02071 Adu-Chr3 40662654 40664917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02071 150 258 Monolignol Biosynthesis Gene Families AT1G72680 36.036 5.03e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02071 K01845 - adu:107478968 333.569