Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02067 ATGGATTTCGACCTTTACTCAAGCGATAATGATGAAGAGTCATCTGAGATGTCGTTGGGTTCACTCGGAATCGAACAAAGAATCGCATCGTTCACAGGGGGTGTTCACGGCAATGTTCCTGTCTTAGTTACCACTGAGGACTTCTTACGTACAGTTTTCACTTCTGAGGAGGAGGCTTACAATGCTTACAAGGGGTTTGCCTGGACAAGGGGTTTTGGTGTTTGCAAGGGGGATGTGGGACGGGTTGATGGTGTTTTGGTGAGGCGGGACATCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATCGGCCAGAACGAGTAAGGGAGGAGCGGCTAGAGAGTCGCACGAACTGCAAAGCAAAATTAAAAATATACTATGATGTCCATGATAATGTGTGGAGAGTGCGAAAGATTATTGATGAACACAACCACAACATGGCCCCGACCGCAGTTTGCAACCTGTTGCCAAGTCACCGAAAAATGAGCGACGGGGATAAGGCTCAAGTGAATAGCATGAAGCAATTCAAAATCCCTACCCCGAAGATAatggcttacatggcaggccaatcggATGCAATAGAGTTGTCTACGTCGAAGCTGTATACAAGAGCTGTTTTTAGGGAGGTTAAAAAGCAAATCAAGGGTGTCGCAACACTATTGTTTCAGGGAAGGGAGAGCATCAGCATGACCATCGTGTATAGCTTTAGTAAAATGGGTAGACCAGATCGTGTATTCAAGGTTTTGTATGATCCGAATGACCGTAAGATTGAGTGTGAGTGTAAGATGTCGGATAGTTATGTTATACCGTGTTCCCATATATTTTGTGTCATGAAGTACGAGGGTATGGAGGAAATTCCTGAAACACTTGTCCTTAGGCGCTGGTGTAAGATTGCAAAAGATTGTACAACGTTGAAAATGGAGAATGATTCAAGGGAACAGGCAAGACTGCTTCGATATAATGCACTATACTCAACTTTATCCCATGTTGTTACACTTGGTTGCAAAGAGGTTGAAGATTTTGCGCTTGCACAGGATGCTATATCAAACCTGGTTGATATATTGCAACAGCGCTGTGTGAAAAAGGATGGTAACAAGGTTTTGCCCAACAACTGTGCGGTCAAAGACCCTACGATGGCAGCTACAAAGGGTGCACCAAAGCGAGAAAAAACCAATTTATGTGCCTCAGAGGAGGAGCCTAAACCAAAGAGGCATTGTTGCACTAAGTGTGGGGTCCCCGGACATACAAGAAGATTATGTGCAAGCCACGATGCGAAGGCTGTACCAACGGGATCAAAAGCACCATCATCAGCTTTCGCTGAGTCTTCATTCGCCAATGTAAAATCCACAAAATAA 1362 0.4391 MDFDLYSSDNDEESSEMSLGSLGIEQRIASFTGGVHGNVPVLVTTEDFLRTVFTSEEEAYNAYKGFAWTRGFGVCKGDVGRVDGVLVRRDIFCHRQGTRSDKHYDRPERVREERLESRTNCKAKLKIYYDVHDNVWRVRKIIDEHNHNMAPTAVCNLLPSHRKMSDGDKAQVNSMKQFKIPTPKIMAYMAGQSDAIELSTSKLYTRAVFREVKKQIKGVATLLFQGRESISMTIVYSFSKMGRPDRVFKVLYDPNDRKIECECKMSDSYVIPCSHIFCVMKYEGMEEIPETLVLRRWCKIAKDCTTLKMENDSREQARLLRYNALYSTLSHVVTLGCKEVEDFALAQDAISNLVDILQQRCVKKDGNKVLPNNCAVKDPTMAATKGAPKREKTNLCASEEEPKPKRHCCTKCGVPGHTRRLCASHDAKAVPTGSKAPSSAFAESSFANVKSTK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02067 453 MobiDBLite consensus disorder prediction 429 453 - -
Adu03g02067 453 ProSiteProfiles Zinc finger SWIM-type profile. 248 284 IPR007527 GO:0008270
Adu03g02067 453 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 195 354 - -
Adu03g02067 453 MobiDBLite consensus disorder prediction 437 453 - -
Adu03g02067 453 Pfam FAR1 DNA-binding domain 63 150 IPR004330 -
Adu03g02067 453 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 167 IPR031052 GO:0006355
Adu03g02067 453 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 195 354 IPR031052 GO:0006355
Adu03g02067 453 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 51 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02067 Adu-Chr3 40609354 40611683 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g02067 FAR1 2.8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02067 - - adu:107478967 519.62