Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02005 ATGATGAGCAACACCATTCTTGTTTTCTTTTTCTTCTTCTTTACAACTCTGCAGCAATCCTACTCTGAAAACAATGACACCTCATACTCCATTTGCAGCAAACCATTCAGCTGCGGAACACGCATCACCAACGCATCCTACCCTTTCTGGGGAGGGAACAGACCCCAGTTTTGTGGAACCAATGGTTTCAAACTCACCTGCACCAACAACACTACTTCACTTCAAATTGCTTCGCAAAAGTTCCATGTACTTGCCATAAACCAAACTCAGAGTACCATGAGACTCGTCAGAACAGACTTTGTCTATGATCGCTGTTCTTCCAACCTCACCAACACTTCTCTCAATGGAAGTCCCTTTCATTTTCTCCCAAACACTCTTCACAATATCACTATATTCTACGATTGTCCATCTGGGGATCATTACACCAACAATTTTACGTGCCAGAATGATAGCAGCAAACGTGGTTTCTATGCTGTCAATGGAACTCAGGCTCAGCAGTTTCGGAACTGTGGGGTTAGTGTTCAAGTGCAAGTTTCAGGTTCTGTAGGGAATAATCTCAAGGGAGCATTGGATGAAGGGTTTGATGTGCAGTATGATGCAGACTTGTCTTCAAAGTGCAAAACATGCACGGAATCTGGAGGAGTATGTGGCACCAATAACGAAACTGATTCCTCTCAGTTTTCATGTTATTGCCCCACTGGAACTCATGCTTCTGCTTGTTCTTCTCATAAAAGTAGTTCGAAGCACAAAGTCTTGAAGCTAGTTTTAGGTTTCCTAGGAACTGGAATTGGACTACCTCTGATTGCTGTGATCATATGCCGCAATAAAGCTAAGGTGTGGAAGTTCATAAAGAATCAATTAGGATTGATGAATAAGCATGATCGAAATATAGAAgcctttctagaaagccaaggtccacttggtataaaaagatataatttctctgacgtgaagaaaatgaccaactccttcaaagtcaaactcggagaaggaggttatggttctgtttacaagggaaaattacccaatggttcctctgtggctgtaaagatgctcaatgactccaaaaggaataacggcgaagaattcgtcaatgaagttgccagcattagcaaaacatctcatgttaatgttgtcactcttgtcggattttgcctcgaaggaagcagaaaagctcttatttatgaattcatgcctaatggttctctcgaaaaatttgttcacaaaaaggccgatcaaagcactccggccctgagttgggacaagttgtaccagattgcaatcgggatagctaaaggattggagtacttgcacaaaggatgcaacactaagattgtgcattttgatattaagcctcataatattctcttggacgaaaattatcgtccaaagatatcagattttggactagctaagctcggcacaaaggatgagagcattatgtcaatgtcatatgctagaggcacagttggatatgtggctccggagatgtgcaacaagagtttcggaggtgtatctcataaatctgatgtttatagctacggaatgatgctgctagaaatggttggagggcagaagaatgcgaatgttgaagcgagtcggtcgagcgagatatactttccacaattggtgatttacaagaagcttgaggttgggagtgacttggggcttgatggggtgatgagcacagaagaaaatgagttggcgaagaaaatgattatggtgggtttgtggtgcattcagacaattccctctcaaaggccaaccataagcagagtgattgacatgttggaaggtagcatggattctatggaaatgccaccaaaaccaaccatgtcatctcctccaAGATCCACAACAGACTTTTCCACTGCATCATTGTCAGGGGATAGTTGTTGA 1899 0.2101 MMSNTILVFFFFFFTTLQQSYSENNDTSYSICSKPFSCGTRITNASYPFWGGNRPQFCGTNGFKLTCTNNTTSLQIASQKFHVLAINQTQSTMRLVRTDFVYDRCSSNLTNTSLNGSPFHFLPNTLHNITIFYDCPSGDHYTNNFTCQNDSSKRGFYAVNGTQAQQFRNCGVSVQVQVSGSVGNNLKGALDEGFDVQYDADLSSKCKTCTESGGVCGTNNETDSSQFSCYCPTGTHASACSSHKSSSKHKVLKLVLGFLGTGIGLPLIAVIICRNKAKVWKFIKNQLGLMNKHDRNIEAFLESQGPLGIKRYNFSDVKKMTNSFKVKLGEGGYGSVYKGKLPNGSSVAVKMLNDSKRNNGEEFVNEVASISKTSHVNVVTLVGFCLEGSRKALIYEFMPNGSLEKFVHKKADQSTPALSWDKLYQIAIGIAKGLEYLHKGCNTKIVHFDIKPHNILLDENYRPKISDFGLAKLGTKDESIMSMSYARGTVGYVAPEMCNKSFGGVSHKSDVYSYGMMLLEMVGGQKNANVEASRSSEIYFPQLVIYKKLEVGSDLGLDGVMSTEENELAKKMIMVGLWCIQTIPSQRPTISRVIDMLEGSMDSMEMPPKPTMSSPPRSTTDFSTASLSGDSC 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02005 632 ProSiteProfiles Protein kinase domain profile. 322 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02005 632 MobiDBLite consensus disorder prediction 615 632 - -
Adu03g02005 632 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Adu03g02005 632 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
Adu03g02005 632 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 628 IPR045874 GO:0004672
Adu03g02005 632 SUPERFAMILY Protein kinase-like (PK-like) 303 598 IPR011009 -
Adu03g02005 632 Gene3D Transferase(Phosphotransferase) domain 1 398 609 - -
Adu03g02005 632 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 4 628 - -
Adu03g02005 632 SMART serkin_6 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02005 632 Pfam Wall-associated receptor kinase C-terminal 156 233 IPR032872 -
Adu03g02005 632 Gene3D Phosphorylase Kinase; domain 1 298 397 - -
Adu03g02005 632 CDD STKc_IRAK 328 599 - -
Adu03g02005 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Adu03g02005 632 Pfam Protein kinase domain 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02005 632 MobiDBLite consensus disorder prediction 601 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02005 Adu-Chr3 37002518 37006304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02005 32 612 Receptor kinase-like Gene Family AT5G38260 41.408 1.69e-145 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Adu03g02005 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02005 - - vra:106766588 892.108