Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02004 ATGGCGGCTAAACGGTTGTTTGATGATTCTGATAGAGATGCAGAAGAGGCAAGCGACAAACGCATGAGACCGAATAGGCCTTCTCTTGCTTCGATAATAGGGGAAGCAGTAAGGGTGAAAAACATGCAGAACCTGTTGTCAGGGTTGGAACCTTTGCTAAGAAAAGTGGTAAATGAAGAGGTGGAAAGAGTCATAATAAGACACCGTCATGGAAGTAACTACACGCGCTCTCCTTCACTGAGAATTGAAGCGGCATCATCATCATCATCGGAGCAACCACCCAAGTTGCAACTCATGTTCACAAACGAACTTTCCCTGCCCATATTCACCTCAAGCAGAATACTCGACGCACAAGGGAACCCCATGCAAGTGATTCTTGTTGACAAAACCAACAATGATCAAATGGTTCGAACAAGCCTTCCCTATCCCATAAAGCTAGAGCTGGTGGTTCTTGATGGTGATTTTCCCGGCGAAGAATCGTGGTGGAGCAGCGAGCAGTTTAACAGGCATATAGTGAAGGAGAGAACAGGGAAGAGGCCCTTGCTTAGCGGAGAATTGAACCTCACCATGAGGGATGGCATTGCACCCATGAATGGGGAGATTGAGTTTACCGATAACTCTAGCTGGATCCGTAGCAGAAAGTTCAGAGTTGCTGTCAGGGTTGCTCCCAACCAACAAGGTGCTATCAGAATTCGTGAAGGCATCACTCAAGCCTTCATAGTTAAGGATCACCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGTTGGAGGACCAAGTGTGGCGCCTAGAAAAGATCGGGAAAGACGGAGCTTTCCACAAAAAACTCTCAGCGGAGGGGATTAATACAGTCCAAGAATTCCTCAAGTTATCCGTTGTGGATCCTCAAATGCTTAGGAAGATATTAGGGATTGGGATGTCGGAGAAAATGTGGGAAGCGACAATAAAGCATGCAAAGACATGTAAAATGGGCAACAAAGTGTATATGTACAGTCATGCTAATTATACCATCTATCTGAGTCCTATATGCCAGTTGATTAGAGCTGATATCAATGGCCAAATCCTGCAAGGCCGAGACCTAAACACCTACAATAGGGGGTATTTAGAGAAAATGGTGAGCGAAGCATATAGCAGATGGAACGAGTTGGAGGAAATTGATCAAGCCGTTTTGAATGATAACGTTGCTTTGTTAACACAAGGAGGGGAGCAATTTGCAAACAACCATGAAGCAGCAGCAGCTACACTTGAATATGATGAAAGCAAGTATTTTGGCTATGTGCCAAGCAGTAGCCATAGCCATAATAATGAGTTGCCAGACTGGGAACTGAATGCCATGGCTTACGGCTTCTCAAAGACTGGAGCTTCAACTTCTGATTCTGAGTGGCCCAATTGA 1395 0.4516 MAAKRLFDDSDRDAEEASDKRMRPNRPSLASIIGEAVRVKNMQNLLSGLEPLLRKVVNEEVERVIIRHRHGSNYTRSPSLRIEAASSSSSEQPPKLQLMFTNELSLPIFTSSRILDAQGNPMQVILVDKTNNDQMVRTSLPYPIKLELVVLDGDFPGEESWWSSEQFNRHIVKERTGKRPLLSGELNLTMRDGIAPMNGEIEFTDNSSWIRSRKFRVAVRVAPNQQGAIRIREGITQAFIVKDHRGELYKKHHPPMLEDQVWRLEKIGKDGAFHKKLSAEGINTVQEFLKLSVVDPQMLRKILGIGMSEKMWEATIKHAKTCKMGNKVYMYSHANYTIYLSPICQLIRADINGQILQGRDLNTYNRGYLEKMVSEAYSRWNELEEIDQAVLNDNVALLTQGGEQFANNHEAAAATLEYDESKYFGYVPSSSHSHNNELPDWELNAMAYGFSKTGASTSDSEWPN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02004 464 PANTHER PROTEIN, PUTATIVE-RELATED 1 436 - -
Adu03g02004 464 Pfam Calmodulin binding protein C-terminal domain 327 386 IPR046829 -
Adu03g02004 464 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Adu03g02004 464 Pfam Calmodulin binding protein-like N-terminal domain 96 244 IPR046831 -
Adu03g02004 464 PANTHER OS02G0177800 PROTEIN 1 436 IPR012416 GO:0005516
Adu03g02004 464 MobiDBLite consensus disorder prediction 1 27 - -
Adu03g02004 464 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02004 Adu-Chr3 36991319 36993578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02004 3 393 Calmodulin-binding Proteins AT5G57580 46.250 1.88e-108 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02004 - - aip:107644281 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02004 03 36991319 36993578 Adu05g02661 05 93497714 93502360 PCT