Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01992 ATGTTCACATCAAGGAAAAAAATCCACAAAGACAAGGATGCTGAGCCAACTGAGTTTGAAGAGTCAGTTGGGCAGGCATTGTTTGATCTTGAAAACACCAACCAAGATCTTAAGAGTGACCTCAAGGATTTATATATTAATTCCGCAGTTCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTTGTTATCCATGTCCCTTACAGATTGAGGAAAGGCTTCAGGAAGATTCATGTTAAGCTTGTTAGGGAGCTTGAGAAGAAGTTTAGCGGCAAGGATGTAGTCTTGCTTGCCACCCGGAGGATAGTGAGACCTCCAAAGAAGGGTTCTGCCGTTCAACGCCCCCGAACCCGCACCTTGACTGCTGTTCACGAGGCAATGATGGAGGACATTGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTGAGGTAG 429 0.4592 MFTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQDLKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVKLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRTRTLTAVHEAMMEDIVLPAEIVGKRVR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01992 142 Coils Coil 27 47 - -
Adu03g01992 142 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu03g01992 142 PANTHER 40S RIBOSOMAL PROTEIN S7 2 142 - -
Adu03g01992 142 Pfam Ribosomal protein S7e 7 142 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu03g01992 142 PANTHER 40S RIBOSOMAL PROTEIN S7 2 142 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01992 Adu-Chr3 36734742 36737734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01992 1 142 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.169 1.60e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01992 K02993 - gmx:100527642 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01992 03 36734742 36737734 Adu03g01992 03 36734742 36737734 ECH