Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01989 ATGATGTCTAGTTCAAAGAGTGTCAGTAGCAGTGGTAGTGAGGATGACAATGAAATTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATCTTCTCACACAATCCATTGCTAACCAAGGCGAAGGACGTTGGAATTTACTTGCTAAATGTTCAGGATTAAAGAGAACAGGAAAAAGCTGCAGATTAAGGTGGCTGAATTATCTAAAGCCGGATGTAAAGAGAGGAAATTTAACACCACAGGAGCAGCTTTTGATTCTTGAACTTCACTCAAAGTGGGGGAACAGGTGGTCAAAGATTGCACAGCATTTACCGGGCAGGACAGACAATGAAATCAAGAACTACTGGAGAACCAAGATTCAGAAACAAGCAAGGCATTTGAAAATCGACACCGATAGCAGAGAGTTTCAAGAACTAGTGAGGCGTTTTTGGATTCCAAGATTGCTTCAGAAAGCAAGAGAATCATCCTCTTCTTCAGCCATGCCAATCCAAAACCAAGCAACTATGCCTGTTTCTCAGTATTCACCAGCAGCAACAACACCACCACCTTGTGTGCACCCAACATGTCCAAATTATTTGGATCAACGACTTGAGCAACACAGCAATGGTTCATGCGTATCCTTCTCTGAACCAAAATTGCCTCAGTTATTGGGATACAACTCCAACAATTTTGGTAATGGCTTGGATACCGATGAATTTGGGACCTTCACATATGATTATGGCTACCATGTAAATAGCAATGGCTATGACAATGAGACCCTCAACATGGAATACCCTGTTGATGATTGCCAAATGGCAAGACACAATTGGGTGAATGATTTTGCATGTGACTTGTGGAACATGGATGAATGCTGCCAATTTACGACCAAGAGATCCACAATCACTAGCATTACACCTTCCCCTCCATCTCCAAAAGCCTCTGACGCCTTTCCACGCTCGATCTGCTTCACCGAGAAGCAAACCCTATCTCTGCCTCCAAAAACCTTGAACTTGCTGGACTCCCTGAAGTACTATTGCACGATCTCTATCAGCCACAGCGACTTCAATTCACCAACCATCAACATTGTCGCGCGACCTCCATCAGTCACGACGAGCCGACGTTGTAGAGCGCGAGGAGCGATCTCTGACAAAGACTGGACTCCGTAG 1143 0.4444 MMSSSKSVSSSGSEDDNEIRRGPWTLEEDNLLTQSIANQGEGRWNLLAKCSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTKIQKQARHLKIDTDSREFQELVRRFWIPRLLQKARESSSSSAMPIQNQATMPVSQYSPAATTPPPCVHPTCPNYLDQRLEQHSNGSCVSFSEPKLPQLLGYNSNNFGNGLDTDEFGTFTYDYGYHVNSNGYDNETLNMEYPVDDCQMARHNWVNDFACDLWNMDECCQFTTKRSTITSITPSPPSPKASDAFPRSICFTEKQTLSLPPKTLNLLDSLKYYCTISISHSDFNSPTINIVARPPSVTTSRRCRARGAISDKDWTP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01989 380 SMART sant 73 121 IPR001005 -
Adu03g01989 380 SMART sant 20 70 IPR001005 -
Adu03g01989 380 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Adu03g01989 380 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g01989 380 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 262 IPR044676 GO:0003700|GO:0006355|GO:0043565
Adu03g01989 380 CDD SANT 78 117 IPR001005 -
Adu03g01989 380 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 4 262 - -
Adu03g01989 380 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Adu03g01989 380 Gene3D - 21 73 - -
Adu03g01989 380 CDD SANT 23 68 IPR001005 -
Adu03g01989 380 Gene3D - 77 120 - -
Adu03g01989 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Adu03g01989 380 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Adu03g01989 380 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Adu03g01989 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Adu03g01989 380 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01989 Adu-Chr3 36669731 36672654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01989 16 286 MYB Transcription Factor Family AT1G68320 46.780 2.36e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g01989 Myb_DNA-binding 4.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01989 K09422 - gmx:778045 389.423