Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01987 ATGGCTGAATTCACAGCAGATTTGAATAGTTTTAGACCTTCTTTTCCTTTCTTAGATATTAACACTATGGAACTAACAAATGGATTCAAAGGGGTGATGAATGTGAATTCACATATCCTAAACAACAACTCAAGTTTGCATATGCAGGACTTTTTTATGCCTTTCAACACAAGTCACAGCTTCACAACTTCTCCAGAATCTGAATTTTCAGGCCTTGTCCATTATGTTAATCACAGTAATCTTCCATCTTCACTTACCATATCTTCAGCAGATAATGAAATCCAACAAGGTAAAAAGCGCAAAGCGGTTGATACGCCGGACACCATGTCAGCAAACTCAACTCCTGCAGTATCTGAGAGTGGCAGCAACACAAAAAATAACTATGGAAGAGGGAAGAGAGGAAAAAAGAATGAAACAGAAGAAAAGAAATCAAAGGAAGTAGTTCATGTTAGAGCAAGAAGAGGCCAAGCTACTGATACTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAACTTAAATTCTTACAGAACATTGTCCCGGGATGTTATAAGACTATGGGAATGGCAATAATGTTGGAAGAGATCATAAACTATGTTCAGTCCTTGCAGCATCAAGTGGAGTTCCTCTCTATGAAGCTTAATGCAGCAAGTGCTTTCTATGACTTCAACTCACAGACAGATGCTTTCGAAACAGTGCTGAGAGCAAGGGCATCAGAAGCAAAAGAGTTGGTGAAGAATGAGAGAGAGGAACATGGCATTCAACCAACTTGGCCTTATTGCTTTTAA 798 0.3897 MAEFTADLNSFRPSFPFLDINTMELTNGFKGVMNVNSHILNNNSSLHMQDFFMPFNTSHSFTTSPESEFSGLVHYVNHSNLPSSLTISSADNEIQQGKKRKAVDTPDTMSANSTPAVSESGSNTKNNYGRGKRGKKNETEEKKSKEVVHVRARRGQATDTHSLAERVRRGKINEKLKFLQNIVPGCYKTMGMAIMLEEIINYVQSLQHQVEFLSMKLNAASAFYDFNSQTDAFETVLRARASEAKELVKNEREEHGIQPTWPYCF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01987 265 MobiDBLite consensus disorder prediction 106 128 - -
Adu03g01987 265 CDD bHLH_AtBPE_like 146 231 - -
Adu03g01987 265 MobiDBLite consensus disorder prediction 92 159 - -
Adu03g01987 265 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Adu03g01987 265 PANTHER TRANSCRIPTION FACTOR BEE 1 2 256 - -
Adu03g01987 265 SMART finulus 162 212 IPR011598 GO:0046983
Adu03g01987 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 206 IPR011598 GO:0046983
Adu03g01987 265 MobiDBLite consensus disorder prediction 131 159 - -
Adu03g01987 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 223 IPR036638 GO:0046983
Adu03g01987 265 Gene3D - 156 219 IPR036638 GO:0046983
Adu03g01987 265 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 256 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01987 Adu-Chr3 36615102 36616502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01987 56 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.351 1.02e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g01987 HLH 2.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01987 - - aprc:113855800 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01987 03 36615102 36616502 Adu03g01987 03 36615102 36616502 ECH