Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01944 ATGAAGAAGGAAAATCAAAACGTTTCCGTTGTAGCTGTTCTCACTGCATTGTTGTTTGCAGGCACATTGTCATCAGTGTGTGCCTCCCACTCCAAGCAAACAAGCTTCAGTGGCGAACTCAGCCATGTGGAAACCATGTATATCAAGCAGCGGCAGTTGCTCTACTACAGGGACGAGTTCGGTGACAGAGGAGAGAATGTCACCGTAGACCCTTCCCTGGTGTTTGAGAACCAGCGCATCAGAAACGCTTACATTGCATTGCAAGCATGGAAGCAAGCCATTGTTTCCGATCCTCTCAACTTCACAGCAAACTGGGTAGGATCTGATGTGTGCAGCTACACTGGGGTCTACTGTGCACCCGCACTGGACAACCCTAAGATCCGCACCGTTGCTGGCATTGATCTGAACCATGCGGATATTGCTGGCTACTTACCGGAAGAGCTTGGTCTCTTGGTGGATCTTGCCCTCTTCCACATTAACTCAAACAGGTTCTGTGGCACATTACCGCACCGCTTCGATAAGCTCAAGCTCTTGTTCGAATTGGATCTCAGTAACAACCGCTTCGCCGGCAAGTTCCCTGCTGTGGTACTGAGACTCCCAACCCTCAAGTTCTTGGATCTGAGGTTCAACGAGTTCGAAGGTGGGGTCCCCAGAGAGCTCTTTGACAAAGATCTTGACGCCATTTTCATCAATCACAACAGGTTCGTCTTTGAAATTCCTGATAACTTAGGAAACTCGCCGGTTTCCGTTATTGTGTTGGCCAACAACAGGTTCCATGGTTGCATCCCTGCAAGCATCGGGAACATGTCGAACCTCAACGAGATCATTCTCATGAACAATGAGCTCAGAGCGTGCTTGCCTTCCGAGATTGGCTTGTTGAAGAACCTCACAGTCTTTGATATCAGCTTCAACCAGCTCTTGGGACCATTGCCGGACGCCATTGGAGGAGCTGTGAGCTTGGAGCAGTTAGACGTAGCGCACAACTTGCTCTCTGGGAACATTCCGGCCAGTATTTGCATGCTGCCAAATCTTCAGAACTTCACTTATTCTTATAACTTCTTCACAGGGGAGCCGCCGGCGTGCCTGAGGCTGGCATCGTTTGATGACCGGACGAACTGCTTGCCGGGAAGGCCGTTGCAGAGATCCGCGGCCCAATGTAGGTCGTTCTTGTCTAAACCTGTGGACTGTAACTCGTTTGGATGCAAGCCATTTGTTCCTTCCCCTTCACATCCTTCGCCTCCTTCACCTGCTTCGCCTCCTTCACCTTCTTCACCTTCTTCACCTTCACCCTCACCCTCTTCACCGCCTTCTATTCCTTCACCTTCTCTGCCTTCTCCCTCTTCGCCACCGTCTCCCCCTTCGCCTTCTTCCCCCAATGCACCAGGACAAGGTCCTCCTCCATCAACTCCTACTCCAATACCTTCTCCACCTAGAAGCGAACCTTCCCCAATTTATAGACCACCCTCTCCTCCCTCCTCACCACCCCCGCCATCACCAATCTATATACCACCTTCTCCCACGCAGCCAGCACCTCCATCTGAGCCTTCACCTACCCCAACCCCAACGCCACCATACTGTGTCCGGTCGCCACCGCCTCCGCCTCCGCCGCCAAATTCTCCATCAATACCGGCTCCTGAATTATCCCCGCCCCCACCTTCGCCTTATCATTATACCTCGCCGCCACCTCCCACTCACTCACCTCCGCCACCCACATATAACCAATCACCGCCACCTCCACCACCCTGCATAGAACCTCCTCCACCGCCACCACCTTCTCCCACACCTTATCTCCCACCACCATCCCCATCACCTCCACCTCCACCGGTTCAACATAATTCCCCGCGACCACATCATCCACCGGTCCACTATAGTTCACCACCACCGCCACCGGCACAATATAGTTCACCACCACCGCCACCGGCACAATATAGTTCTCCACCACCCCCTGTCCATTACAGTTCACCACCACCACCAACCCCTGTTCATTATAGTTCTCCGCCGCCACCAGCATCATCACCACCCTGCGAAGAAACTCCACCATCCCCGACCCCTTCCCCACCACCATCCCCTGTATATGAAGGGCCATTGCCACCTGTCGTCGGAGTCCCATACTCATCGCCTCCACCACCACCTTTCTATTAA 2142 0.5322 MKKENQNVSVVAVLTALLFAGTLSSVCASHSKQTSFSGELSHVETMYIKQRQLLYYRDEFGDRGENVTVDPSLVFENQRIRNAYIALQAWKQAIVSDPLNFTANWVGSDVCSYTGVYCAPALDNPKIRTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTLPHRFDKLKLLFELDLSNNRFAGKFPAVVLRLPTLKFLDLRFNEFEGGVPRELFDKDLDAIFINHNRFVFEIPDNLGNSPVSVIVLANNRFHGCIPASIGNMSNLNEIILMNNELRACLPSEIGLLKNLTVFDISFNQLLGPLPDAIGGAVSLEQLDVAHNLLSGNIPASICMLPNLQNFTYSYNFFTGEPPACLRLASFDDRTNCLPGRPLQRSAAQCRSFLSKPVDCNSFGCKPFVPSPSHPSPPSPASPPSPSSPSSPSPSPSSPPSIPSPSLPSPSSPPSPPSPSSPNAPGQGPPPSTPTPIPSPPRSEPSPIYRPPSPPSSPPPPSPIYIPPSPTQPAPPSEPSPTPTPTPPYCVRSPPPPPPPPNSPSIPAPELSPPPPSPYHYTSPPPPTHSPPPPTYNQSPPPPPPCIEPPPPPPPSPTPYLPPPSPSPPPPPVQHNSPRPHHPPVHYSSPPPPPAQYSSPPPPPAQYSSPPPPVHYSSPPPPTPVHYSSPPPPASSPPCEETPPSPTPSPPPSPVYEGPLPPVVGVPYSSPPPPPFY 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01944 713 Pfam Leucine rich repeat N-terminal domain 86 118 IPR013210 -
Adu03g01944 713 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 11 543 - -
Adu03g01944 713 MobiDBLite consensus disorder prediction 407 713 - -
Adu03g01944 713 Gene3D Ribonuclease Inhibitor 83 248 IPR032675 -
Adu03g01944 713 PRINTS Proline rich extensin signature 403 419 - -
Adu03g01944 713 PRINTS Proline rich extensin signature 423 435 - -
Adu03g01944 713 PRINTS Proline rich extensin signature 437 458 - -
Adu03g01944 713 PRINTS Proline rich extensin signature 461 477 - -
Adu03g01944 713 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 543 - -
Adu03g01944 713 Gene3D Ribonuclease Inhibitor 249 389 IPR032675 -
Adu03g01944 713 SUPERFAMILY L domain-like 83 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01944 Adu-Chr3 34570604 34572745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01944 2 401 Trihelix Transcription Factor Family AT4G18670 73.815 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01944 - - zju:107431856 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01944 03 34570604 34572745 Adu03g01944 03 34570604 34572745 ECH