Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01941 ATGTTTCAAGCATATATATATGTATGTGGTGATCAGGAGAGAGCAAAGATTTTGATGAAATGGGCAGAACTAATTGACGAAAACGTGGAAGAACTCGCGGCACTAGATACCATTGATGCTGGAAAATTGTATCATATGTGCAAGGCTGTGGACATTCCTACAGCATCAAACACTCTACGCTACTATGCTGGTGCTGCTGACAAAATCCATGGAGAGGTGTTAAAGATGTCTGGGCAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCATGGAATTTCCCAACCACCATGTTCTTCCTTAAAGTTAGCCCTTCCTTGGCTGCAGGCTGCACCATGGTCCTCAAGCCTGCAGAGCAGACACCACTCTCTGCTCTGTTTTATGCTCATCTAGCCAAACTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTTCCCGGATTCGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAAGTTAGCTTCACAGGTTCAACAGAAGTAGGGCGTGAAATAATGCAAGCTGCAGCAAAGAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAATCACCTCTCATTATCTTTGATGATGCTGATATTGACAAAGCTGCTGACCTTGCTCTCTTGGGCATCCTATTTAACAAGGGAGAAGTCTGTGTTGCAAGTTCGCGTGTGTTTGTTCAGGAAGGTATCTACAATGAATTTGAAAAGAAGCTAGTAGAGAAGGCAAAAGCATGGGTTGTTGGGGATCCTTTTGACCCTAAATCTCAGCAAGGACCTCAGGTTGACAAGAACCAATTTGAAAAAGTCCTTTCCTACATTGAACATGGAAAGAGACAAGGTGCTACCCTGTTGACTGGGGGTAAAACACTGGGCAACAAGGGCTATTACATTCAACCAACAATTTTTTCTGATGTGAAGGAGGATATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGGCACTCAAGAAGTTCAAGACGATTGAGGAAGCAATTAAGAGTGCAAACAACACAAGATATGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCACGGTCCATTCGTGCAGGGACTATTTGGATCAATTGCTACTTTGCGTTTGGGGATGATGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATTCCGGATTGGATGCACTTCACAAATACCTACAAGTTAAATCTGTTGTCACACCTATTTACGATTCTCCTTGGCTTTGA 1296 0.4329 MFQAYIYVCGDQERAKILMKWAELIDENVEELAALDTIDAGKLYHMCKAVDIPTASNTLRYYAGAADKIHGEVLKMSGQFHAYTLMEPIGVVGHIIPWNFPTTMFFLKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAADLALLGILFNKGEVCVASSRVFVQEGIYNEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKNQFEKVLSYIEHGKRQGATLLTGGKTLGNKGYYIQPTIFSDVKEDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDSGLDALHKYLQVKSVVTPIYDSPWL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01941 431 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 197 204 IPR029510 GO:0016491
Adu03g01941 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 419 IPR016162 GO:0016491
Adu03g01941 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 201 390 IPR016163 GO:0016620
Adu03g01941 431 Pfam Aldehyde dehydrogenase family 12 421 IPR015590 GO:0016491
Adu03g01941 431 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 12 431 - -
Adu03g01941 431 SUPERFAMILY ALDH-like 12 427 IPR016161 GO:0016491
Adu03g01941 431 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 225 236 IPR016160 GO:0016491
Adu03g01941 431 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01941 Adu-Chr3 34500604 34503328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01941 13 431 Aldehyde Dehydrogenase Gene Family AT3G24503 72.143 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01941 K12355 - gmx:100817721 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01941 03 34500604 34503328 Adu05g02568 05 91705141 91715566 PCT