Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01922 ATGCCTTCTCTGTCTATCTTCCCGTCACTGCCATCGCTTCAAAACCCTAACTTGGAGCATGCCCACCTCTTCAAATCCATCGGAACCCTAAATTTCAGTTTAACTTCACGAACAGAGTGTCACTGCCACTTCTCGCACCACTTCAAAGCCACTCTCTCTCTTCTCTCTAGGGTACAGAACCATAGAATCCCGTCCCGGAGGATACACTGCAAAGTCTTGAAGGATCCTGGGGAAGAGGTTAAGGTGGTTTTGGACTCCGACGGCGGAGGTGGCGGCGGCGGCGACGACGATGGCGATGGTGGGGATAAGAGAGAGGTTAAGAAGAAAGAAGGGTCTTCGGGGCCCTTGCCAGAATGGTTGAATTTCAATTCCGATGACGCAAAGACGGTGTTCGCGGCTCTGGCTATATCGCTTGCGTTTCGTGCGTTCGTGGCTGAGCCGAGGTACATTCCTTCGCTGTCAATGTATCCTACCTTTGATGTTGGAGATCGAATTGTTGCTGAAAAGGTTTCATACTACTTTAGAAAGCCATGTGCAAATGACATAGTGATATTCAAAAGTCCTCCAGTCCTTCAAGAAGTTGGATATACTGATGATGATGTTTTCATAAAACGGATTATTGCAAAGGGAGGTGATATTGTGGAGGTTCGCAAAGGTCGTCTCATAGTTAACGGGGTTGAGAGGAGTGAAAAGTTCATCCTTGAACCACCTTCTTATGAGATGAAGCCCACGCGTGTTCCGGAAAACTACGTCTTTGTGATGGGGGACAACCGCAATAATAGCTATGATTCCCATGTGTGGGGTCCGTTGCCAGCCAAGAATATCATCGGAAGATCAGTGTTCCGATACTGGCCTCCAAATAGAATAGCCGGCACTGTTTCGGAGGATACATGTCCCGTTGAAACCAAGCAGGACACAACTACTCTAGTTTCTTCTCAATGA 942 0.4788 MPSLSIFPSLPSLQNPNLEHAHLFKSIGTLNFSLTSRTECHCHFSHHFKATLSLLSRVQNHRIPSRRIHCKVLKDPGEEVKVVLDSDGGGGGGGDDDGDGGDKREVKKKEGSSGPLPEWLNFNSDDAKTVFAALAISLAFRAFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRIIAKGGDIVEVRKGRLIVNGVERSEKFILEPPSYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIAGTVSEDTCPVETKQDTTTLVSSQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01922 313 PRINTS Bacterial leader peptidase 1 (S26A) family signature 143 159 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu03g01922 313 PRINTS Bacterial leader peptidase 1 (S26A) family signature 202 214 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu03g01922 313 PRINTS Bacterial leader peptidase 1 (S26A) family signature 246 265 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu03g01922 313 MobiDBLite consensus disorder prediction 83 113 - -
Adu03g01922 313 MobiDBLite consensus disorder prediction 96 112 - -
Adu03g01922 313 ProSitePatterns Signal peptidases I signature 3. 251 264 IPR019758 GO:0004252|GO:0016021
Adu03g01922 313 Pfam Signal peptidase, peptidase S26 127 284 IPR019533 GO:0004252|GO:0006465
Adu03g01922 313 ProSitePatterns Signal peptidases I serine active site. 152 159 IPR019756 GO:0004252|GO:0016021
Adu03g01922 313 Gene3D Umud Fragment, subunit A 140 298 - -
Adu03g01922 313 CDD S26_SPase_I 146 278 IPR019533 GO:0004252|GO:0006465
Adu03g01922 313 SUPERFAMILY LexA/Signal peptidase 141 290 IPR036286 -
Adu03g01922 313 PANTHER SIGNAL PEPTIDASE I 104 295 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu03g01922 313 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 104 295 - -
Adu03g01922 313 TIGRFAM sigpep_I_bact: signal peptidase I 128 286 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu03g01922 313 ProSitePatterns Signal peptidases I lysine active site. 204 216 IPR019757 GO:0008236|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01922 Adu-Chr3 33966948 33969360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01922 155 285 MADS-box Gene Family AT1G29960 31.579 1.01e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01922 K03100 - gmx:100815810 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01922 03 33966948 33969360 Adu03g01922 03 33966948 33969360 ECH