Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01917 ATGGAAGGTGGTCGCAACACACGAGTCAATGCTTCTAATGAGGGTTTCGTCGAACGGCTGCAAAGAGAGAGGGAGCAGAGCAAGCAAGAGGGGAGGGCGAAGCCGAACATCAAAAAGTATTTATATGTGATGGGGGAAGGAGAAGGAGGTGATTGCGCTTTGAGAAATGTGGCATCGGATGCACCTACGGTGCCGGTGCCGGTGCCGCCGTCGGATATTCCCGCCAAGAAGCTTGCAAGGCAGCTTGATTTCACCGGCTTAGCCGGGATGCCGGGCGGCGCGCCATTTCCAGAGCACTCGCAGTTGCGGCAGCAACAGCAACAACAGCTTCAGCCGCAAGTGGTGGCACAGTCACAGTCACGGTCACATCCGCAGACAATGACGCAGCCGATGCTAATGATGCCGATGCCGCATCCGCCGCAGGCGCCACGCCTTTCAACCAGGGTTGGTAAATCAGAATCTCCAAAACCAAGATCAAGGACCAATTTTGAAACAAAAGAAGCTACTCCAAAGAAGCAAAAGCAATGCAATTGTAAACACTCAAAGTGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATACTGTGATGGTTGCAACTGTGTAAATTGTTACAACAATGTTGATAATGAAGCAGCCAGACGAGAAGCTGTTGGAGCTACCTTAGAACGTAATCCAAATGCATTTAGGCCAAAGATTGCGAGCAGCCCTCATGGACCACATGACAACAGGGAGGATGCTGGCGAAGTTGTTATATTGGGAAAGCACAATAAGGGATGTCATTGTAAAAAGTCTGGTTGCCTCAAGAAGTACTGCGAGTGTTTCCAAGCCAACATTCTTTGTTCCGAAAATTGTAAATGCATGGATTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAAGCATTGTTCCATGGAGATCAAAATATCAACATGACATATATTCAGCAAGCAGCAAATGCTGCAATAACTGGTGCTGTCGGTTCCTCTGGCTTTTCATCACCGCCAGTATCAAAGAAAAGAAAAGGTCAGGAACTCTCTTTTGTGCCAACAGCCAAGGATCCATCCATTGGAAAGCTAGGAAAACAGGCAAACCATGTCAAAGGTCCTTTACCCTCCTCCTCCTTTTCTCCTGCCCCTAGTACTCATGTTGGACCTGCAACATTAGGTCCTTCAAAATTTATATACAGGTCTGTATTGGCAGACATACTACAACCAGAGCACTTGAAGGAGCTTTGTTCAGTCCTAGTGCTACTATCTGGACAAGCCGCGAAGACAGTAACAGACCAGAAAAATATAATGCACAAACATATAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAACAACAGTTACCAAGCCAAACGGGAACTAATGTTGAGAAAGCTACGTCTGGTGATTGTTCAAGTGAGAACCGAATAGATAAGGTCAGCCCAGATAATTCTAGTTCAGACGGTGTTGGTGTCCTCAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGCGATGAGCATGATACAATGTTCATGACTGCTGTCTCTCCTAGTGAGCCAGTTTCTCACACTTGTAACATATCTTCTCAATTGCCTTGTGGACAAAAAATGACTGAGTTATATGCAGAGCAAGAAAAGATTGTTTTGACAAAGTTCAGAGATTTTCTTAATAGAGTTATCACTATGGGAGAAATAAACGAAACAAAATATTCTTCATTAGCCAGAAGTGAATTGGAGAGTAGGGACCCAGTTGTCAATGGCACTGAAAATGCTAGAACTGAGACAGTAGATGAAGGAGCCACTAAAATTGGTGTTGCCAAAGCTGTTGTTCATCCTCTGGCGACAAGTAGGAATTTGACTAATTCAATATCTTTGGTCCATAGTAATCTTGTTCCTGAAAATGGTGAAAAAGAGAAGTATTTTGAGGGCTTTTCTGGGCTTTGTTCATTTGTTATTGTTCAAATGTTAGAGCCTTACAGTTTGGCCTACAGCACACTATAA 2007 0.4434 MEGGRNTRVNASNEGFVERLQREREQSKQEGRAKPNIKKYLYVMGEGEGGDCALRNVASDAPTVPVPVPPSDIPAKKLARQLDFTGLAGMPGGAPFPEHSQLRQQQQQQLQPQVVAQSQSRSHPQTMTQPMLMMPMPHPPQAPRLSTRVGKSESPKPRSRTNFETKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVDNEAARREAVGATLERNPNAFRPKIASSPHGPHDNREDAGEVVILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNINMTYIQQAANAAITGAVGSSGFSSPPVSKKRKGQELSFVPTAKDPSIGKLGKQANHVKGPLPSSSFSPAPSTHVGPATLGPSKFIYRSVLADILQPEHLKELCSVLVLLSGQAAKTVTDQKNIMHKHIEDQTETSLASSTQQQLPSQTGTNVEKATSGDCSSENRIDKVSPDNSSSDGVGVLKGRPMSPGTLALMCDEHDTMFMTAVSPSEPVSHTCNISSQLPCGQKMTELYAEQEKIVLTKFRDFLNRVITMGEINETKYSSLARSELESRDPVVNGTENARTETVDEGATKIGVAKAVVHPLATSRNLTNSISLVHSNLVPENGEKEKYFEGFSGLCSFVIVQMLEPYSLAYSTL 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01917 668 MobiDBLite consensus disorder prediction 99 129 - -
Adu03g01917 668 SMART CXC_2 171 211 IPR033467 -
Adu03g01917 668 SMART CXC_2 256 297 IPR033467 -
Adu03g01917 668 ProSiteProfiles CRC domain profile. 172 296 IPR005172 -
Adu03g01917 668 MobiDBLite consensus disorder prediction 440 495 - -
Adu03g01917 668 MobiDBLite consensus disorder prediction 443 487 - -
Adu03g01917 668 PANTHER TESMIN/TSO1-RELATED 109 614 IPR028307 -
Adu03g01917 668 PANTHER TESMIN/TSO1-RELATED 71 143 IPR028307 -
Adu03g01917 668 MobiDBLite consensus disorder prediction 17 35 - -
Adu03g01917 668 MobiDBLite consensus disorder prediction 151 170 - -
Adu03g01917 668 MobiDBLite consensus disorder prediction 1 36 - -
Adu03g01917 668 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 71 143 - -
Adu03g01917 668 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 109 614 - -
Adu03g01917 668 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 173 208 IPR005172 -
Adu03g01917 668 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 259 293 IPR005172 -
Adu03g01917 668 MobiDBLite consensus disorder prediction 88 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01917 Adu-Chr3 33895122 33899869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01917 73 598 CPP Transcription Factor Family AT4G29000 55.254 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Adu03g01917 TCR 3.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01917 - - gmx:100777698 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01917 03 33895122 33899869 Adu03g01917 03 33895122 33899869 ECH