Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01910 ATGAATAGAGGAGGTGGTGTGGTTGAGCAAATGATGGGTTCCGGGAACCCTAACTGCTGGAACTCTCCTTCTTCTGATTTCTTGTCATACTCCTCCACTACTAATACTCCTTCTTCATACACCAACTTTCTTCTGAATCCACCACCACCATATGTACCTCATCCTCCCACTTCTTACTGGCATGAACATGAGCATGAGCATCACAATAATACTAATCCAGAGCTTCCCGGCGACTCATGGACTCACCTAATCATGTATCATCATGCATCAGAGCTTGATGATGTGAAGCAAGAAAGGTCCGTAGAGAGCAGTTATGTGTACGGTGATGGAAGTGCAGGGAAACCTAACTGGTCTCACAATCAGATGATACTGCTTCCTCCTAATGCTTCTTCTTCTTCCAATTCTACTTCACCCAAATCATCATGTGTCACCTTCACCACCAGCATCTTGGACTTCTCCACCCAGCCCACGCTTCCTCCACCTCCACCTCCACCTCCATCTTCCGCCGAGTGCAATAGCATCGCAGGTGGTGGAGCATCGAAGAAAGCTAGGGTTCAACAGTCGACGTCTTCGGCGACGTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATCGCAGCTCTCCATCAACTCGTTTCCCCATTTGGAAAGACTGACACTGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCTTACTTGGTCAATGGATCACCAAACATGAAACACCAAAATCCTGTTCAAGGAGAGAAGAGTTGTTTATTCCCTGAAGATCCCGGTCAGCTGCTGAATGAAAACTGCTTGAAGAAGAGGAAAGCAACTACTCAGCAGGAGGGTTCCCAGCATCAAGAAGAAGCAAAGAAGGACCTGAGGAGTAGGGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCTGATTATTGGTCTCCTGCTTTTGGTGCTGGAGGATTTCGATAG 1014 0.4704 MNRGGGVVEQMMGSGNPNCWNSPSSDFLSYSSTTNTPSSYTNFLLNPPPPYVPHPPTSYWHEHEHEHHNNTNPELPGDSWTHLIMYHHASELDDVKQERSVESSYVYGDGSAGKPNWSHNQMILLPPNASSSSNSTSPKSSCVTFTTSILDFSTQPTLPPPPPPPPSSAECNSIAGGGASKKARVQQSTSSATFKVRKEKLGDRIAALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLVNGSPNMKHQNPVQGEKSCLFPEDPGQLLNENCLKKRKATTQQEGSQHQEEAKKDLRSRGLCLVPVSCTLQVGSDNGADYWSPAFGAGGFR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01910 337 CDD bHLH_AtbHLH_like 191 242 IPR045239 -
Adu03g01910 337 MobiDBLite consensus disorder prediction 153 189 - -
Adu03g01910 337 MobiDBLite consensus disorder prediction 155 169 - -
Adu03g01910 337 Gene3D - 183 244 IPR036638 GO:0046983
Adu03g01910 337 MobiDBLite consensus disorder prediction 55 75 - -
Adu03g01910 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 247 IPR036638 GO:0046983
Adu03g01910 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
Adu03g01910 337 PANTHER OS05G0228400 PROTEIN 79 322 - -
Adu03g01910 337 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 322 - -
Adu03g01910 337 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01910 Adu-Chr3 33789442 33792440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01910 175 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 56.429 1.83e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01910 - - ahf:112790234 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01910 03 33789442 33792440 Adu03g01910 03 33789442 33792440 ECH
Adu03g01910 03 33789442 33792440 Adu05g02520 05 90669079 90673793 PCT