Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01906 ATGTCTGCAGAAAAGGGGTATGTAGGGTTGGGAGAGGTTGGTGAAATGGAAGAAAGCATTGGGTTGAACCTGAAAGCAACTGAGTTGAGGCTTGGGTTGCCAGGGTCAGAGTCACCGGTGAAGAGTACTAGTTTGGGGGCAAAGAGGGGTTTCTCGGACGCCAATGATGGCAAGTGGGTTCTTTCTGGGAATGGAAAAGCTGGATCTGACTTGGCTTTGGGCAAAGATGCTTCCTTGTTCTCTCCTCCCTCTGACAATACCAACAATGACCCTCTTCCACTTCCACAACCTTCAAAGCCTATTCCTGCTCCTGCTGCAAAGGCACAAGTTGTTGGATGGCCACCAATCCGTTCATTCAGGAAGAACTCAATGGCAACTCAGCCTCCTCAAAAGAATGAAGCTGATGCAGAACCCAAGCCTGGTTGCCTTTATGTCAAAGTCAGCATGGATGGCGCCCCATACTTGAGGAAAATGGATCTCAACAATTATGCTTCCTATAGGGACCTCTCTTCAGCACTCGAAAAGATGTTTAGTTGTTTTACTCTCGGTCAATGCGGCTCTCATGGGGTTTCTAGCCGAGATAATTCAAGCGAAAGCAAATTGAGGGATCTCCTCCACGGCTCGGAATACGTGCTCACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGACTCTTGCAAGAGGTTGAGGATAATGAAGAGTTCCGAAGCAATTGGGTTAGCACCTAGAGCCATGGAAAAGTGCAGAAGTCGCAATTAG 789 0.4791 MSAEKGYVGLGEVGEMEESIGLNLKATELRLGLPGSESPVKSTSLGAKRGFSDANDGKWVLSGNGKAGSDLALGKDASLFSPPSDNTNNDPLPLPQPSKPIPAPAAKAQVVGWPPIRSFRKNSMATQPPQKNEADAEPKPGCLYVKVSMDGAPYLRKMDLNNYASYRDLSSALEKMFSCFTLGQCGSHGVSSRDNSSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCRSRN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01906 262 SUPERFAMILY CAD & PB1 domains 138 243 - -
Adu03g01906 262 MobiDBLite consensus disorder prediction 32 107 - -
Adu03g01906 262 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 100 255 IPR003311 GO:0005634|GO:0006355
Adu03g01906 262 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 87 IPR003311 GO:0005634|GO:0006355
Adu03g01906 262 ProSiteProfiles PB1 domain profile. 142 244 IPR000270 GO:0005515
Adu03g01906 262 PANTHER AUXIN-INDUCED PROTEIN 12 87 - -
Adu03g01906 262 PANTHER AUXIN-INDUCED PROTEIN 100 255 - -
Adu03g01906 262 Gene3D - 137 255 - -
Adu03g01906 262 MobiDBLite consensus disorder prediction 88 102 - -
Adu03g01906 262 Pfam AUX/IAA family 27 253 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01906 Adu-Chr3 33664072 33666363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01906 85 247 B3 DNA Binding Superfamily AT3G61830 30.488 2.40e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu03g01906 AUX_IAA 2.6e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01906 K14484 - gmx:100803754 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01906 03 33664072 33666363 Adu05g02519 05 90605751 90613992 PCT