Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01876 ATGAACATAACTGCAGGAAGCTTCAGACTTATTTTTACTCCTCAGACAGACTCGTTTGCATTCGTGAATGCCATTGAACTCTTCTTACTCCCCCGCTTCTTAATTGCCAATCAAGTCTCGCGTTTCAATCCGCAACCTTCCATTGGACAAGATTCCTTGTCCACCTACAGTGGCGTGCTTTCCCGAGTGTTGGAGACCAAATACAGGCTTAACATCGGTGGTCGTGTCATCCCAAGAGGGCAAGACCCATTATTGAGGCTCTGGAGCTCGGATGAAACTTACCTTGTTAATCAAAAGGAGGTGAAGCTTGTTGCATACCTTGGTAATATAACATTCCTGGTTGGTAAAGACTCTGACGGTCCAAATGCTAATTATTATACAGCGCCCAGTGTTATCTACAAAACAGCTAGAGAAATTAATGATACCTTTCAAAACATAAGTTGGGTTCTTCCAGTTGACAGGAATGTAGACCACCTTGTTCGGGTACACTTTTGTGACTTTTGGAGTATCCAGTGTGGTCTTACAATCTTTGGTCTATACATTTATGACCAATTTACTTCGTTTGTAAATAATGACACATTGGTGTCTCAACAATTGCCTGCTCCTTATTATTATGATTTTTTGGTACACTCTGATGATTCAGGCTTCATGAGGATTAGTGTAGAGCCACAACAATCTTCCCTTGTTGTCAGAGCCTTTTTAAGCGGACTAGAAATAATGGTAATGGTCTTGGGGTTAGTTTGGCATCTTAAGATCCGTAAACAGAGGCCTTCTGATGTGTTGTCAATTCCTACCATTGTAGGAGAGGGTTCTCCAAACAGAACGAGTGAGAGAAACGTTAATCTTGGACTAAAGATCTCTTTGCATGATATTCAATTGGCAACCGAGAATTTCGATGAGAAACAAATAATTGGAACTGGTGGTTTCGGCAATGTATACTTGGGAGTCCTTAGGAATGGTACAAGAGTAGCTGTGAAGCGCAGTAAATCAGAGTCAAGTCAAGGCCTTCTGCAGTTTGAAACCGAGATCATGGTTTTGTCTAAGATTCGTCACAGGAACCTTGTTTCTTTGATAGGGTATTGTGAGGAGAATTCTGAAATGATATTGGTTTATGAATATATGGAGAATGGGGCACTCAGAGATCATTTATACGATACCAAATTGCCAAGCCTGTGTTGGAAGCAGAGACTTGAGATTTGCATTGGAGCTGCCAAAGGCCTTCATTATCTTCACGAAGGAGCACCCGGGGGAATCATCCACCGCGATGTGAAGTCTACCAACATATTGCTTGATGAGAACCACGTGGCTCAGGTTTCAGACTTCGGCATTTCGAAAACAGCTCCACTTGACCATCAAACACATGTTAGTACTAATGTCAAAGGCACTTTTGGGTATCTTGATCCTGAATATTTTAAGACGGAAAAGTTGACAGAAAAATGTGATGTCTATTCATTTGGGGTAGTTCTTCTCGAAGTGTTGTGTGCAAGGCCAACCATTGACCAATCTCTTCCAAGAGAGCAAATGAACTTAGCAGATTGGGGAATCCTTTGCAAAAGAAAAGGGATGTTGCAAGCCATAATTGATCCTTCCATAAAGGACCAAATAGATCAAAACTCGCTCGAAAAATTTAGTGACATAGTGGGAAAATGCCTACAAGAATATGGTTCTAATAGGCCAACCATGGGTGAAGTGTTGCGGAGCTTGAAGTATGCTCTACATTTCCATGAAGCTTCAATCCACGAAGATGGTTCCAGTAATGAGAGCGTTAATAATAATGCAGCAAAAGCTTTTTAA 1794 0.4136 MNITAGSFRLIFTPQTDSFAFVNAIELFLLPRFLIANQVSRFNPQPSIGQDSLSTYSGVLSRVLETKYRLNIGGRVIPRGQDPLLRLWSSDETYLVNQKEVKLVAYLGNITFLVGKDSDGPNANYYTAPSVIYKTAREINDTFQNISWVLPVDRNVDHLVRVHFCDFWSIQCGLTIFGLYIYDQFTSFVNNDTLVSQQLPAPYYYDFLVHSDDSGFMRISVEPQQSSLVVRAFLSGLEIMVMVLGLVWHLKIRKQRPSDVLSIPTIVGEGSPNRTSERNVNLGLKISLHDIQLATENFDEKQIIGTGGFGNVYLGVLRNGTRVAVKRSKSESSQGLLQFETEIMVLSKIRHRNLVSLIGYCEENSEMILVYEYMENGALRDHLYDTKLPSLCWKQRLEICIGAAKGLHYLHEGAPGGIIHRDVKSTNILLDENHVAQVSDFGISKTAPLDHQTHVSTNVKGTFGYLDPEYFKTEKLTEKCDVYSFGVVLLEVLCARPTIDQSLPREQMNLADWGILCKRKGMLQAIIDPSIKDQIDQNSLEKFSDIVGKCLQEYGSNRPTMGEVLRSLKYALHFHEASIHEDGSSNESVNNNAAKAF 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01876 597 SUPERFAMILY Protein kinase-like (PK-like) 279 568 IPR011009 -
Adu03g01876 597 SMART serkin_6 298 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01876 597 Gene3D - 63 242 - -
Adu03g01876 597 Gene3D Phosphorylase Kinase; domain 1 269 373 - -
Adu03g01876 597 ProSiteProfiles Protein kinase domain profile. 298 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01876 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Adu03g01876 597 Pfam Malectin-like domain 6 240 IPR024788 -
Adu03g01876 597 PANTHER OS07G0166700 PROTEIN 15 584 IPR045272 GO:0004714|GO:0006468
Adu03g01876 597 CDD STKc_IRAK 304 569 - -
Adu03g01876 597 Gene3D Transferase(Phosphotransferase) domain 1 374 595 - -
Adu03g01876 597 Pfam Protein tyrosine and serine/threonine kinase 301 568 IPR001245 GO:0004672|GO:0006468
Adu03g01876 597 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Adu03g01876 597 PANTHER BNAC03G27170D PROTEIN 15 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01876 Adu-Chr3 33078442 33080351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01876 1 586 Receptor kinase-like Gene Family AT3G46290 42.504 5.21e-161 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Adu03g01876 PK_Tyr_Ser-Thr 6.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01876 - - adu:107480521 769.229