Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01871 ATGGGAAGACACTCTTACTGTTACAAGCAGAAGCTTTGGAAGGGTCTATGGTCTCCTAAAGAAGATGAAAAGCTTCTCAGACATATCATTAAGTACGGTCATGGATGTTGGAGCTCTGTTCCTAAGCAAGCAGGTTTGCAGAGGTGTAGTAAGAGTTGCAGGCTTAGAGAAGGAACTAACACAATCTCCACTACTACTATTCACAACAGGTTGGGGTGGGGGCTAACTAGCTTATCAGAATCTATTGACAACAAAGCTTCATTTCAAGGACTCATTCAATTGAAGACGTGCAACATGTCACATAGTGTAGCAAAACAGAATGCATCAACTTCAGAGTTCAGATACCATTCACTAAAAAATTGTGCACAGGTGAATGGATATGAAACTAGGATATTGAGCACAAGTGAGCACAGCACATCCAATGTGATAAAAGTTAAGGTAGAGAAGATACTGGTGGAGAAGATACAAATTTTGCAAAACGAGAGGCCACCACTGCCTTCTTCTTTTTCACCGTCGTATGCCGTATCAAACGTGCCAAAGAATTGGAAAATGTCAACACAAGACATCCTCAGTTCCTGTATGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAATTTATGGTTCAAGTTTCTGAGATAGAAGATATGAATATAAAGGCCTTAATAAGGTTTGGAAGGAAAACTGTCAGAAGCCAAGGCAAGTGGAAATCCTATGAAGATCCAGGAAGCAAAGTATGGATTATATTTATAGGCTTGTTCATGGTCAGGTTACTATAG 777 0.4028 MGRHSYCYKQKLWKGLWSPKEDEKLLRHIIKYGHGCWSSVPKQAGLQRCSKSCRLREGTNTISTTTIHNRLGWGLTSLSESIDNKASFQGLIQLKTCNMSHSVAKQNASTSEFRYHSLKNCAQVNGYETRILSTSEHSTSNVIKVKVEKILVEKIQILQNERPPLPSSFSPSYAVSNVPKNWKMSTQDILSSCMSPSCTEFSREEFMVQVSEIEDMNIKALIRFGRKTVRSQGKWKSYEDPGSKVWIIFIGLFMVRLL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01871 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 56 IPR017930 -
Adu03g01871 258 Pfam Myb-like DNA-binding domain 14 56 IPR001005 -
Adu03g01871 258 SUPERFAMILY Homeodomain-like 7 56 IPR009057 -
Adu03g01871 258 SMART sant 13 63 IPR001005 -
Adu03g01871 258 CDD SANT 17 56 IPR001005 -
Adu03g01871 258 Gene3D - 14 56 - -
Adu03g01871 258 PANTHER MYB DOMAIN PROTEIN 55 1 56 - -
Adu03g01871 258 PANTHER MYB DOMAIN PROTEIN 55 1 56 - -
Adu03g01871 258 PANTHER MYB16 PROTEIN 1 56 - -
Adu03g01871 258 ProSiteProfiles Myb-like domain profile. 9 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01871 Adu-Chr3 32901692 32905512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01871 1 56 MYB Transcription Factor Family AT4G01680 89.286 2.02e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu03g01871 Myb_DNA-binding 7.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01871 K09422 - adu:110278510 124.02