Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01866 ATGGAGAGCATACTCAAGCCCCTCAGAGATGGCGAGTCCGTCCTCGACCTCAGCCCGAGATCCACCGTCAGCGGCGGCGTCGAGGACGTCTACGGCGAGGATCGCGCCACCGAGGACCAACTTGTCACCCCCTGGACTTTCTCTGTTGCCAGTGGGTACTCTTTGCTGAGGGATCCGCAGTACAATAAAGGGCTTGCTTTCACCGAGAAAGAGAGGGATGCGCATTACTTGTGTGGCCTCCTCCCTCCCACTGTTATCACTCAGCAACTTCAGGAGAAGAAGCTGATGAAAAGCATCCGAGAGTATCAGGTTCCCTTGCAAAAGTACATGGCAATGATGGACCTTCAGGAGAGAAATGAAAGGCTGTTTTACAAGCTTCTAATCGACAATGTTGAGGAATTGCTTCCGGTTGTATACACTCCTACGGTTGGTGAGGCTTGCCAGAAATATGGGAGTATCTTCAGGCGTCCTCAGGGTCTTTACATCAGTTTGAAAGAGAAGGGGAAAATACTTGAGGTCTTGAAAAACTGGCCCGAGAGGAGTATTCAAGTAATTGTGGTTACCGACGGCGAGCGAATTTTGGGACTTGGAGATCTTGGATGTCAGGGGATGGGAATTCCTGTTGGTAAATTGGCTTTGTACACTGCTCTAGGTGGAGTTCGTCCTTCAGCTTGTTTACCTGTTACAATTGATGTGGGAACCAATAATGAGAAATTACTGAATGATGAGTTCTACATTGGACTTGGGCAAAAGAGGGCAACTGGGAAGGAATATTATGATCTTCTACACGAGTTCATGTGTGCAGTGAAGCAAAATTACGGCGAAAAAGTTCTTGTACAGTTTGAGGATTTTGCAAATCACAATGCTTTCGAGTTACTTGCAAAATACGGCACAACTCATCTAGTATTCAATGATGATATTCAGGGGACTGCGTCTGTTGTTCTGGCTGGAGTTGTAGCAGCTCTAAAGCTTATTGGTGGCATTCTGGCTGATCACACATTCCTCTTCCTTGGTGCTGGAGAAGCCGGAACTGGTATAGCAGAGCTAATAGCTCTTGAGATGTCGAAGCAGACGAAGGCACCGATAGAGGAGAGCCGCAAGAAGATATGGCTTGTAGACTCAAAAGGTCTGATTGTTAGTTCACGGAAGAATTCGCTTCAACACTTCAAGAAACCTTGGGCCCATGACCATGAACCTCTTAACAATCTCCTAGATGCTGTTAAGGTAATCAAGCCAACAGTTTTGATTGGATCATCAGGAGTGGGAAGAACATTTACAAAGGAAGTAGTTCAGGCTATGACTGCAAACAATGAAAAACCTCTCATTATGGCTCTTTCCAATCCAACATCTCAGTCTGAGTGTACAGCTGAAGAGGCTTATCAGTGGAGTGAGGGTCGTGCAATATTTGCTAGCGGGAGTCCATTTGATCCTGTAGAATACAAGGGAAAAGTTTACGTGCCTGGGCAGGCCAACAATGCTTATATTTTCCCAGGCTTTGGTTTGGGTTTAGTAATCTCAGGAACAATTCGAGTGCATGATGATATGCTTCTGGCAGCCTCTGAAGCGTTGGCTAAACAAGTGACAGATGAGAACTACAATAAGGGCTTGATTTACCCACCATTCACTGATATCAGAAAGATTTCTGCTAACATAGCTGCAAATGTTGCTGCTAAGGCATATGAACTAGGCTTGGCTACGCGTCTTCCTCGCCCTGCGGATCTTGTGCAGTATGCTGAGAGCTGCATGTATAGTCCTGTATATCGCAACTATAGGTGA 1776 0.4617 MESILKPLRDGESVLDLSPRSTVSGGVEDVYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLCGLLPPTVITQQLQEKKLMKSIREYQVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLGQKRATGKEYYDLLHEFMCAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGILADHTFLFLGAGEAGTGIAELIALEMSKQTKAPIEESRKKIWLVDSKGLIVSSRKNSLQHFKKPWAHDHEPLNNLLDAVKVIKPTVLIGSSGVGRTFTKEVVQAMTANNEKPLIMALSNPTSQSECTAEEAYQWSEGRAIFASGSPFDPVEYKGKVYVPGQANNAYIFPGFGLGLVISGTIRVHDDMLLAASEALAKQVTDENYNKGLIYPPFTDIRKISANIAANVAAKAYELGLATRLPRPADLVQYAESCMYSPVYRNYR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01866 591 Gene3D - 305 591 - -
Adu03g01866 591 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 29 306 IPR046346 -
Adu03g01866 591 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 590 IPR036291 -
Adu03g01866 591 SMART Malic_M_2 307 560 IPR012302 GO:0051287
Adu03g01866 591 PIRSF ME 24 591 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 Gene3D - 50 304 IPR037062 GO:0004471
Adu03g01866 591 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Adu03g01866 591 PANTHER MALIC ENZYME-RELATED 20 591 - -
Adu03g01866 591 PANTHER MALIC ENZYME 20 591 - -
Adu03g01866 591 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Adu03g01866 591 SMART malic_2 116 297 IPR012301 GO:0004471
Adu03g01866 591 CDD NAD_bind_1_malic_enz 307 585 - -
Adu03g01866 591 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 PRINTS Malic enzyme signature 437 453 IPR001891 GO:0004470|GO:0004471
Adu03g01866 591 Pfam Malic enzyme, NAD binding domain 307 559 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01866 Adu-Chr3 32690284 32694457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01866 K00029 - gmx:100782096 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01866 03 32690284 32694457 Adu09g00311 09 3291242 3298122 ECH
Adu03g01866 03 32690284 32694457 Adu07g01770 07 52961229 52967193 ECH
Adu03g01866 03 32690284 32694457 Adu08g00871 08 16245153 16249381 ECH
Adu03g01866 03 32690284 32694457 Adu03g01866 03 32690284 32694457 ECH