Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01865 ATGATGGATAACGTTAACGTTATAGATTTGGGAGGCTTCGATCTGGACGAGGCTCTGGCTACAGTGGCCGGAGAATCGCAGGTGGTAATTACGGCGGCTTCGAAGAGCTTCGTGTCAAAGTTGCCGGTGGCAGAGGCGGAAGAGGTGGAGGAAAAGGATGTGTGCTCGGTATGCATGGAAGGGTTTGAGGGCGGAGGAAACAAGCGAGTCCCATGCGGCCACGTGTACCACTCAGAATGCATCATTCTGTGGCTGTCCCGCTCCAACTCCTCTTGCCCTCTTTGCCGCCGCCATATCTTCCTCAACTAA 309 0.5437 MMDNVNVIDLGGFDLDEALATVAGESQVVITAASKSFVSKLPVAEAEEVEEKDVCSVCMEGFEGGGNKRVPCGHVYHSECIILWLSRSNSSCPLCRRHIFLN 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01865 102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 100 IPR013083 -
Adu03g01865 102 SUPERFAMILY RING/U-box 46 101 - -
Adu03g01865 102 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE 12 99 - -
Adu03g01865 102 SMART ring_2 55 95 IPR001841 -
Adu03g01865 102 ProSiteProfiles Zinc finger RING-type profile. 55 96 IPR001841 -
Adu03g01865 102 SMART ringv_2 54 96 IPR011016 GO:0008270
Adu03g01865 102 Pfam Ring finger domain 54 96 IPR001841 -
Adu03g01865 102 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 12 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01865 Adu-Chr3 32676208 32676654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01865 33 96 C3H Transcription Factor Family AT3G02340 45.588 1.15e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01865 - K22378 gmx:102669154 95.5153