Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01841 ATGTGTGGCATGAAGATCGAGGAGTCAGACGATACGGGGAGTAGTAGGGATGAAGAGAAGGGGGAGATGCAGATTGTGAGGGTTGATTCAAAGAGAGCGTTGGTGGGAGCAGTTGCTCGGATCCTGTTTTACCCGACACTCTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAATTCAGGTGGTGGGATCAAGTTGATGAGTTTTTGTTGCTGGGCGCAGTCCCATTCCCCAAAGATGTTCCTCACTTGAAGAAGCTTGGCGTTGGTGGTGTAATAACTCTTAATGAACCGTATGAAACTTTGGTGCCTTCATCATTGTATCATGCTCATGGAATTGATCACTTGGTAATTCCCACAAGGGATTATCTCTTTGCCCCCTCCTTTGCTGATATCAGCCGGGCTGTGCAGTTCATTCATCAGAATTCAACTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGGGGAAGGAGTACAACAATTGTGCTTTGCTATCTGATTGAATACAAGCACATGACAGCTGCTGCTGCCCTGGAATATGTGCGGTCTCAAAGACCCAGAGTGATGCTAGCTCCATCGCAATGGAAGGCTGTTCAAAAGTATAGCAAACGCAGACCTTGTTCTTTAGCACGCTCACCCTCATGGGATGCAGTTCTTATAACCAAAGCTGATCTTGAAGGCTACCAGAGCTCTGGTAATGCTGGTATGGAGCTGGCCATTGCTCCTAAAGTGCCAAAGACTAATCCCATGATATCAAGACTATCTTGTCTGTTTGCATCCTTAAAGACATCCGGAAATAGTGTACCCATGACGAGGTGGTTACCGGTTTCTGAGTCACGTGCTTGTTAA 855 0.4596 MCGMKIEESDDTGSSRDEEKGEMQIVRVDSKRALVGAVARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFADISRAVQFIHQNSTCGKTTYVHCKAGRGRSTTIVLCYLIEYKHMTAAAALEYVRSQRPRVMLAPSQWKAVQKYSKRRPCSLARSPSWDAVLITKADLEGYQSSGNAGMELAIAPKVPKTNPMISRLSCLFASLKTSGNSVPMTRWLPVSESRAC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01841 284 Pfam Dual specificity phosphatase, catalytic domain 84 205 IPR000340 GO:0008138|GO:0016311
Adu03g01841 284 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
Adu03g01841 284 Gene3D Protein tyrosine phosphatase superfamily 62 208 IPR029021 -
Adu03g01841 284 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 209 IPR020422 GO:0006470|GO:0008138
Adu03g01841 284 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 130 198 IPR000387 GO:0016311|GO:0016791
Adu03g01841 284 SMART dsp_5 65 206 IPR020422 GO:0006470|GO:0008138
Adu03g01841 284 PANTHER - 4 284 - -
Adu03g01841 284 PANTHER OS01G0739200 PROTEIN 4 284 - -
Adu03g01841 284 CDD PTPMT1 62 206 IPR044596 GO:0004721
Adu03g01841 284 MobiDBLite consensus disorder prediction 1 22 - -
Adu03g01841 284 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01841 Adu-Chr3 32065051 32069359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01841 24 272 Protein tyrosine phosphatase (PTP) family AT2G35680 51.536 8.15e-96 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01841 - - adu:107478561 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01841 03 32065051 32069359 Adu03g01841 03 32065051 32069359 ECH