Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu03g01836 | ATGGCCATGCCATGCAAATTGTTTTTCCGAAATCCCCCAGATGGTCTTCTTGAGATATCTGACAGGGTCTATGTTTTTAATTGTTGTTTCAACATTCGATGTGATTGGAGAGACGAATCTTACGAAGTCTACGTGAACGGGATTGTTGGTCAATTTCGAGAGAATGTGCCTAACGCTTCCATTATGGTATGCAATTTTCGCGAGGAAAACACTAAAAGCAAGTTGGATAACATATTCTCTAAGCATGAAATTAATCTCATGAACTATCCTTGCCACCACCATGGTTTCCCTATGCTCAAATTGGAGGCCATACATCATTTTCTAAATTCATGTGATAGTTGGCTCTCACATGGGCAAAATAAGGTGTTGTTAATGCATTGTGAGCGTGGTGGCTTGCCAGTTTTGGCCTTCATGTTGGCTGCATTGTTGATTTTCTTGAAACAATATGAAGGGGAGCAGAGGACGTTAGATATGGTTTACAAGCAGGTACGTCGTGATTTTTTACAATCCTTAACAATGGTGAATCCAATCCCTTCCCAATTGCGGTATTTACGATATGTTTCCAAGACCAATATGGCCTTTGATTGGCCTTCATTGGATAGGACACTTAGGTTGGACTACATCATTATGACATTTCTTCCAAACTTTAATGAGAATGGTGGATGTTTTCCAATATTTAGAATTTATGGCGAAGATCCCTTTCTTGTTGACAAGAATCCTAAGATCCTATACTCAACACCAAAGAGTCCCAAAAACATTCAAGCTTATAAACAGGGAGAGCGTGATGATAAAATCAAAGTCAATATCAACTGTCGGATTCAAGGTGATGTGCTGATTGAAAGTGTTAATTTGGATAGTGACTTGGAAAATGAACAGATGATATTCCAAACGATGATTAACACAAATTTCATTAGATCTAATTTGTTGATGCTTAATCGGGAGAAAATTGATATTTTGTGGGATGCAAAAGATCGCTTCCCAAGGGATTTCAAACTAGAGATAACTTTCACAGAGAAAGATGTTGCTCCAAAGACTGAGTCATCCTCTAGCTTTGAGGAAAGGGAGGGATTACCAATTGAAGAATTTACCAAAGCCAAAGAGATTTTTAACCATGGAGATTGGACGAGTCCTAATGATGAAGATCACACAGTAAATGATACTAACACAATCAATGATACCTCAATTTCACCACAAACACCTCCATTGAGGTCTCCCAGAAGTGATAAAAATGTTGATGAGTCTCTTCCTCATCAATTGCATTCAAAATCACAAAATCCTAATACTGATGTAACAAGACCTGATTTGTTGCTTTCACAGCAAAAAATCCAACCCCCACTGGATCAAATTAGAGCTCCTCTATCCCCACCAACTCCTCCAAAGAATGAAACAATTGTAAGAGTTGGATCCCCTCTTTCTCCTCCAACTCCAAATGCTACAATGCCTACTACCACCCCACCTCCGCCGCCAACGCCACCCCCGGTTGGAGACCATTACGCTAACAATGGTTTTCCAACTTCATTGTGTATTGGTCGTGGAAAGAATGACACTGGCAATCACACGATGCATTCAATGAGTAACACCAAAAAGTTAAAAACATTGCATTGGTTAAAATTATCTCGAGCAGTGAAAGGAAGTTTGTGGGCTGAGGCACAAAAATCTGGTGAAGCTTCCAAGACACCAGATATTGATATGTCTGAGCTTGAAAATCTCTTCTCAGCAATAACACCAAGTTTAGGCCAAGCAAAGAAATCAAAGATCCAAAACTTAGTTACACCAAAATCTGATAAAGTGCAACTGATTGAACATACACGAGCATATAATTGTGAAATCCTTCTCTCAAAAGTGAAAGTCCCGTTGAAGGATTTAATGAGCTCAGTTTTAGCATTAGAAGAGACAGCATTAGATATTGATCAGGTTGAGAACCTGATAAAGTTTTGTCCAACAAAGGAAGAGAAGCAAGTACTTAAGGATTATGACGGAGACAAGGAAAAATTGGGGAGATGTGAACAGTTCTTCTTAGAGTTGATGAAAGTTCCAAGGGTAGAATCCAAGCTGAGAGTTTTTTCATTCAAGATTGAATTCAACACTCAGGCTTATGACCTTAGAAATAACATCAATATTGTTAATGCTGCTGCAGAAGAGGCATGA | 2148 | 0.3892 | MAMPCKLFFRNPPDGLLEISDRVYVFNCCFNIRCDWRDESYEVYVNGIVGQFRENVPNASIMVCNFREENTKSKLDNIFSKHEINLMNYPCHHHGFPMLKLEAIHHFLNSCDSWLSHGQNKVLLMHCERGGLPVLAFMLAALLIFLKQYEGEQRTLDMVYKQVRRDFLQSLTMVNPIPSQLRYLRYVSKTNMAFDWPSLDRTLRLDYIIMTFLPNFNENGGCFPIFRIYGEDPFLVDKNPKILYSTPKSPKNIQAYKQGERDDKIKVNINCRIQGDVLIESVNLDSDLENEQMIFQTMINTNFIRSNLLMLNREKIDILWDAKDRFPRDFKLEITFTEKDVAPKTESSSSFEEREGLPIEEFTKAKEIFNHGDWTSPNDEDHTVNDTNTINDTSISPQTPPLRSPRSDKNVDESLPHQLHSKSQNPNTDVTRPDLLLSQQKIQPPLDQIRAPLSPPTPPKNETIVRVGSPLSPPTPNATMPTTTPPPPPTPPPVGDHYANNGFPTSLCIGRGKNDTGNHTMHSMSNTKKLKTLHWLKLSRAVKGSLWAEAQKSGEASKTPDIDMSELENLFSAITPSLGQAKKSKIQNLVTPKSDKVQLIEHTRAYNCEILLSKVKVPLKDLMSSVLALEETALDIDQVENLIKFCPTKEEKQVLKDYDGDKEKLGRCEQFFLELMKVPRVESKLRVFSFKIEFNTQAYDLRNNINIVNAAAEEA | 715 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu03g01836 | 715 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 485 | 714 | - | - | |
| Adu03g01836 | 715 | MobiDBLite | consensus disorder prediction | 468 | 490 | - | - | |
| Adu03g01836 | 715 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
| Adu03g01836 | 715 | MobiDBLite | consensus disorder prediction | 474 | 490 | - | - | |
| Adu03g01836 | 715 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 194 | IPR029021 | - | |
| Adu03g01836 | 715 | Gene3D | Formin, FH2 domain | 518 | 715 | IPR042201 | - | |
| Adu03g01836 | 715 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 202 | 338 | IPR035892 | - | |
| Adu03g01836 | 715 | MobiDBLite | consensus disorder prediction | 370 | 431 | - | - | |
| Adu03g01836 | 715 | Pfam | Formin Homology 2 Domain | 525 | 714 | IPR015425 | - | |
| Adu03g01836 | 715 | MobiDBLite | consensus disorder prediction | 381 | 405 | - | - | |
| Adu03g01836 | 715 | Gene3D | - | 203 | 337 | - | - | |
| Adu03g01836 | 715 | MobiDBLite | consensus disorder prediction | 417 | 431 | - | - | |
| Adu03g01836 | 715 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 12 | 188 | IPR029021 | - | |
| Adu03g01836 | 715 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 520 | 715 | IPR015425 | - | |
| Adu03g01836 | 715 | Pfam | C2 domain of PTEN tumour-suppressor protein | 201 | 338 | IPR014020 | - | |
| Adu03g01836 | 715 | PANTHER | FORMIN-J | 1 | 714 | - | - | |
| Adu03g01836 | 715 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu03g01836 | Adu-Chr3 | 31995993 | 32001686 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu03g01836 | 466 | 714 | Protein tyrosine phosphatase (PTP) family | AT5G58160 | 58.800 | 7.40e-79 | 273 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu03g01836 | - | - | ahf:112775940 | 1371.3 |