Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01818 ATGGAGATTGTAAAATTCTTGTACTTGAATCTTCTCGCGACTTTCACATTCTCAGTGGTTTTAGCAATGGACCCTTATTCAGAGGCACTCCTGGGCCTGAAATCTGAGCTTGTAGATGATGATAACACACTGCATGATTGGAAAGTACCCTCTCAACAAGGGAACTCAACAGAATCCTATGCATGTTCTTGGACAGGTATCAAGTGTAACAACGACTCAACAGTTGTAACCTCCATAGACCTCTCAATGAAGAAACTCGGTGGCGTAATCTCAGGGAAACAATTCACCATCTTCACAAACCTTGTTGATCTCAACCTCAGCTACAACTTCTTCTCTGGCCAGCTTCCAGTGCAAATTTTCAACCTCAAAACCCTGAAAAGCCTTGATATCAGCAGAAACAACTTCTCTGGTCACTTTCCAAATGGAATTTCCAGCCTCCAAAATCTTCTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGTCCATTGCCTGCAGAACTTTCGCAGCTACAGAATCTCAAGGTTCTTAATCTAGCTGGGAGTTACTTCAGTGGACCAATTCCATCTGAGTATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTTGCAGGGAATTCTCTCACAGGGAATATTCCTTCAGAACTTGGAAACCTCAAAACAGTGACCCATATGGAGATTGGTTACAACAATTATGACGGTCTTATACCGCCACAATTGGGTAACATGAGTCAGATTCAGTATCTTGACATAGCAGGTGCAAATCTCTCAGGCCCCATACCAAAGCAACTCTCCAACCTCACCAGTTTGCAATCACTATTCCTGTTCCGGAACCAGCTCACAGGATCAATACCAAGTGAGTTGGGCAATATAAAAAATCTCACAAATTTAGATTTATCTGATAACTTCCTTTCAGGGTTTATTCCAGAGAGCTTTTCAGAGTTAAAGAACCTAAGACTGCTGAGTCTCATGTACAATGACATGACTGGCAATGTTCCACAAGGCATAGGTGGACTTCCGTCCTTGGAAACCCTTCTCATTTGGAACAACCGGTTCTCCGGATTACTTCCACAGAGCCTGGGGAGCAACTCTAAACTCAAGTGGGTGGATGCATCCACAAACAACTTGGTTGGCAGCATTCCACCGGACATTTGTGCAACTGGAGAGCTGTTTAAGTTGATCTTGTTCTCAAACAAATTCACAGGAGGTCTCTCCCCTCTCTCTGATTGTTCTTCCCTTGTTCGCCTTCGCCTCGAAGATAACTCATTCTCCGGAAGGATCCCTCTCAGATTCAGCCATCTTCCTGATATTTCATATGTTGACCTGTCCCACAACAACTTTGTTGGTGGGATTCCCTCCGATATTTCTCAAGCATATCAACTTCGGTATTTCAATGTATCTTATAATCCACGATTAGGAGGCACCATCCCCGCACGAATATGGTCTTTGCCCATACTTCAAAACTTTTCATCATCTTCTTGCGGTATTTCAGGTGATCTTCCTCAGTTTGAGTCCTGGAAGTCATTCAAATTGATGGGTAGCAATGCATTTGTTGGGAATCCTGAGCTTTGTGGAGCACCGCTTCGACCATGTCCTGGTTCAGTTGGAATATTGGGGAGCAAAGGAACATGGAGGCTTACCCGTATTCTGCTACTCTGTTTAGGGTCGTTAGTAATCCTTCTAGGAGTCGCTTTTGGAACACTTTATTTAAGAAGAGGGATCAAAAGTCGATGGAAGATGGTCTCATTTGCTGGACTCCCACAATTCACAGCAAATGATGTTTTGACAAGCTTCAGTGGCACAAAAACAACAGAAGTTCCATCACCATCACCACCTTTGGTTTCAAAGGCGGTTCTCCCTACAGGGATAACAGTCGTAGTTAAGAAGATTGAATGGGAACAGAGGAGCATCAAGGTCATGTCGGAATTCATAATTCGCCTTGGAAATGCGAGGCACAAGAACTTGATCAGATTATTGGGGCTATGCCACAATAATCAGTTAGTCTATCTTCTGTATGATTATGTGCCCAACGGGAATTTGGCTGAAAAAATTGGAAGGAAGTGGGACTGGGCAGCTAAGTTCAGAACTGTGGTTGGAATCGCAAGGGGACTAAGATTCCTTCACCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAATCAAGCAACGTTGTGTTTGATGAAAATATGGAACCCCATTTGGCTGAATTTGGGTTCAAACATCTGTTAAGGTTGACCAACGGCTCATCTCCTGCTACAACCAAGTGGGAAACAGAATATAATGAAGCCGTGAAAGAGGAACTCAGAATGGATGTCTACCAATTCGGAGAGATGACTCTGGAAATTTTAACTGGAGGAAGGTTGACTAATGCAGCAGCTACCATACAAAACAAACCATGGCATGTTCTTCTCAGAGAAATTTACGACGAGAATGAAGTCAGTTCCACCAGTACAATGCAGGAGATCAAACTGGTTCTCGAGGTTGCTATGCTTTGCACTAGCAGCAGGTCAAATGATCGACCATCGATGGATGATGCTCTGAAGCTTTTGCCAGGGATCAAACCTATAGAAGATGGCAGAGCTTCAAGAAAATGA 2595 0.4358 MEIVKFLYLNLLATFTFSVVLAMDPYSEALLGLKSELVDDDNTLHDWKVPSQQGNSTESYACSWTGIKCNNDSTVVTSIDLSMKKLGGVISGKQFTIFTNLVDLNLSYNFFSGQLPVQIFNLKTLKSLDISRNNFSGHFPNGISSLQNLLVLDAFSNSFSGPLPAELSQLQNLKVLNLAGSYFSGPIPSEYGSFRSLEFLHLAGNSLTGNIPSELGNLKTVTHMEIGYNNYDGLIPPQLGNMSQIQYLDIAGANLSGPIPKQLSNLTSLQSLFLFRNQLTGSIPSELGNIKNLTNLDLSDNFLSGFIPESFSELKNLRLLSLMYNDMTGNVPQGIGGLPSLETLLIWNNRFSGLLPQSLGSNSKLKWVDASTNNLVGSIPPDICATGELFKLILFSNKFTGGLSPLSDCSSLVRLRLEDNSFSGRIPLRFSHLPDISYVDLSHNNFVGGIPSDISQAYQLRYFNVSYNPRLGGTIPARIWSLPILQNFSSSSCGISGDLPQFESWKSFKLMGSNAFVGNPELCGAPLRPCPGSVGILGSKGTWRLTRILLLCLGSLVILLGVAFGTLYLRRGIKSRWKMVSFAGLPQFTANDVLTSFSGTKTTEVPSPSPPLVSKAVLPTGITVVVKKIEWEQRSIKVMSEFIIRLGNARHKNLIRLLGLCHNNQLVYLLYDYVPNGNLAEKIGRKWDWAAKFRTVVGIARGLRFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGFKHLLRLTNGSSPATTKWETEYNEAVKEELRMDVYQFGEMTLEILTGGRLTNAAATIQNKPWHVLLREIYDENEVSSTSTMQEIKLVLEVAMLCTSSRSNDRPSMDDALKLLPGIKPIEDGRASRK 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01818 864 SMART serkin_6 588 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01818 864 PANTHER UNNAMED PRODUCT 5 508 - -
Adu03g01818 864 PANTHER UNNAMED PRODUCT 506 855 - -
Adu03g01818 864 Gene3D Ribonuclease Inhibitor 190 282 IPR032675 -
Adu03g01818 864 Gene3D Ribonuclease Inhibitor 26 189 IPR032675 -
Adu03g01818 864 SMART LRR_typ_2 98 122 IPR003591 -
Adu03g01818 864 SMART LRR_typ_2 266 289 IPR003591 -
Adu03g01818 864 SMART LRR_typ_2 290 313 IPR003591 -
Adu03g01818 864 SMART LRR_typ_2 194 218 IPR003591 -
Adu03g01818 864 SMART LRR_typ_2 338 361 IPR003591 -
Adu03g01818 864 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 506 855 - -
Adu03g01818 864 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 508 - -
Adu03g01818 864 SUPERFAMILY RNI-like 78 400 - -
Adu03g01818 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Adu03g01818 864 Gene3D Phosphorylase Kinase; domain 1 611 673 - -
Adu03g01818 864 ProSiteProfiles Protein kinase domain profile. 553 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01818 864 SUPERFAMILY L domain-like 365 509 - -
Adu03g01818 864 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Adu03g01818 864 Pfam Leucine rich repeat 292 345 IPR001611 GO:0005515
Adu03g01818 864 SUPERFAMILY Protein kinase-like (PK-like) 613 850 IPR011009 -
Adu03g01818 864 Gene3D Transferase(Phosphotransferase) domain 1 674 861 - -
Adu03g01818 864 Pfam Leucine Rich Repeat 125 146 IPR001611 GO:0005515
Adu03g01818 864 Gene3D Ribonuclease Inhibitor 385 531 IPR032675 -
Adu03g01818 864 Gene3D Ribonuclease Inhibitor 283 384 IPR032675 -
Adu03g01818 864 Pfam Protein tyrosine and serine/threonine kinase 621 847 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01818 Adu-Chr3 31322352 31325766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01818 2 850 Receptor kinase-like Gene Family AT5G51350 54.425 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu03g01818 PK_Tyr_Ser-Thr 5.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01818 - - dcr:108219880 1013.06