Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01797 ATGCCATATATGTTGTTCAACATCGATGGTCATCAAGTTCCACAACAGACAGTTATTGAAGTTGGAGATACCTTTAAGAGAATACTAGAAGATTTAAAGACATTCAAAATATCTAGGGAAGGTTATGTTCTGCTTCAGTTTGCACCCGCAAGTGCTTCGTGGCAGTATAATTGGACTAGAAAGCAGGTGTTCTCATTATCAGTGGGTGAAATGGGAACTGTGATTAGCCTTGGTAAAAGGGAGTCTTGTGAATTCTTCCATGATCGTATGAAGAGCAAAAGgtag 285 0.386 MPYMLFNIDGHQVPQQTVIEVGDTFKRILEDLKTFKISREGYVLLQFAPASASWQYNWTRKQVFSLSVGEMGTVISLGKRESCEFFHDRMKSKR 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01797 94 Pfam Whirly transcription factor 31 93 IPR013742 GO:0003697|GO:0006355|GO:0006952
Adu03g01797 94 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 34 93 IPR013742 GO:0003697|GO:0006355|GO:0006952
Adu03g01797 94 Gene3D Transcriptional Coactivator Pc4; Chain A 21 94 IPR009044 GO:0003677|GO:0006355
Adu03g01797 94 SUPERFAMILY ssDNA-binding transcriptional regulator domain 31 91 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01797 Adu-Chr3 30747653 30750001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01797 31 93 Whirly Transcription Factor Family AT1G14410 61.905 1.54e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Adu03g01797 Whirly 2.7e-22 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01797 - - adu:107478549 194.512