Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01785 ATGGATCACAGGTCAGAAGCACCACCATCTTCCCCTCCATTGAGTGTCTACCTAGCTGCTCTTAGCATTGCATCGCTAATTTTCTTGTGCATTTATGGTTCTTCTTCTACCGTCATTTATGTGGTCATATTCGTCACGATTTGCATCGCGATTTGCGTCGTCAGCGTGTTTGTTTCAAGATTCATCCATGACAGAAAACTGCAAGCAAATGTTGTGCGGTTTGGTAACGTATCAATTGCATCAATTAGTAGCAGTGATTGTGCAATCTGTATAGAGAATTTTCAGAACGGAGAGGAATGCTTAGTTTTCCCAAATTGTGGCCATCTCTTTCATTTGAATTGTATCAACCATTGGATACAGGGCAATCCCACATGCCCAATTTGCCGTCATCGTATTCCATTACCAACCACCGTTATCACCGCCCAAACTATACAAGCATAG 441 0.424 MDHRSEAPPSSPPLSVYLAALSIASLIFLCIYGSSSTVIYVVIFVTICIAICVVSVFVSRFIHDRKLQANVVRFGNVSIASISSSDCAICIENFQNGEECLVFPNCGHLFHLNCINHWIQGNPTCPICRHRIPLPTTVITAQTIQA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01785 146 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 60 135 - -
Adu03g01785 146 Pfam Ring finger domain 86 129 IPR001841 -
Adu03g01785 146 SMART ring_2 87 128 IPR001841 -
Adu03g01785 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 133 IPR013083 -
Adu03g01785 146 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 60 135 - -
Adu03g01785 146 SUPERFAMILY RING/U-box 80 136 - -
Adu03g01785 146 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01785 Adu-Chr3 30439355 30439795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01785 54 129 C3H Transcription Factor Family AT2G27940 38.272 7.59e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01785 - - aip:107632916 265.388