Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01780 ATGAAGTGGTGGTTCTTGCTAAAGACCTTCGTAAAAGATAATAGTGGAGAATTTTACGAGAAACACTACCCTCCATACTTGAATGATGATATATGGCGTTTGAAAAAAATTGCAAAGGATGGAAAAATCCACAAGCGGCTCTCTTCCCATGGAATTCACACTGTTAAGGATCTCCTGCAGCTATACACAACCGAACCATTTTCATTATATGTGGCGGAGAGAAAGCACATATGTTGA 237 0.3924 MKWWFLLKTFVKDNSGEFYEKHYPPYLNDDIWRLKKIAKDGKIHKRLSSHGIHTVKDLLQLYTTEPFSLYVAERKHIC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01780 78 PANTHER OS02G0177800 PROTEIN 10 70 IPR012416 GO:0005516
Adu03g01780 78 Pfam Calmodulin binding protein central domain 27 69 IPR046830 -
Adu03g01780 78 PANTHER CALMODULIN-BINDING PROTEIN 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01780 Adu-Chr3 30361565 30362122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01780 11 61 Calmodulin-binding Proteins AT5G57580 62.745 5.97e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01780 - - lja:Lj1g3v4777410.1 102.064