Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01770 ATGGTACCCAAAAGCAAGGCTATAAAGGCAGATCCTTGCCAGCCCTCATGGGACCCGCAAGCCTTGCAAGATGTACCAACACAGATAGTGTCTCATGCCTATGACTCAGCTTTTGCCTCTTTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAGATAATATTGTTTTTCAAAATTCATATTCCAATATTGTCATAG 321 0.4206 MVPKSKAIKADPCQPSWDPQALQDVPTQIVSHAYDSAFASFQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKIILFFKIHIPILS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01770 106 Gene3D - 56 98 IPR036638 GO:0046983
Adu03g01770 106 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 92 IPR036638 GO:0046983
Adu03g01770 106 Pfam Helix-loop-helix DNA-binding domain 64 90 IPR011598 GO:0046983
Adu03g01770 106 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 106 IPR011598 GO:0046983
Adu03g01770 106 PANTHER TRANSCRIPTION FACTOR BHLH30 34 94 IPR045847 GO:0003700|GO:0006355
Adu03g01770 106 PANTHER TRANSCRIPTION FACTOR BHLH51 34 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01770 Adu-Chr3 30133792 30134958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01770 31 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 43.662 5.72e-11 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g01770 HLH 7.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01770 - - adu:107459448 137.502