Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01754 ATGGCTTCTAATCTTCCAACTATCGCTGCCGCAACGGCAAGGTCCGCTGCCACGACGACGTCGTTTCAGGAAAAACATCACCGTTCGGTCTTCGAGCTCTCACCTAGCGTCTTCGACTCTTGCTACTTTCTACCTTCTACTCACTCTTCGATTTACGAGCCCAACGACAATGATCGTCGCAACGTAGGCCTTGAAACGCCCTCAAACAACGTCATCGCCGATGGTCCCCAAGACACCGTCGTTTCAGCGCCTAGGTGGACGTGCAACACCTGTAAGGCCCAATTCGATTCCCTCCAAGACCAGCGTTCGCATTTCAAATCTGATATTCATCGATTCAATGTGAAGCTGACAGTTGCGGGAAAGAATATTGTTAAGGAAGAGGATTTTGAGGTGTTGACATCTGAATTTGTCAAAGACTATGATGTTTCAAGCATATCAGGATCAGAGAGTGACAGCGACAGTGAAAATGAGTCTCAAAATCGCAATGAAGTGCGTGACAAATCAAGAGAAATTCTTAAACAAAAGCTATTTGTTGGTCTTCAATCAGGTCAAAGTGTTTCTCTCTGGAAGTGCTTGATTATGAATATGAGTGATGAGAATGGAAGTGCAGAGAACGAAGTGTGTGAGAGGTTGAAATCTCTGATTCTTGAGCCCAGGGATAATAGTCATTTGCGAATCGTACTGCTTGCATCTGGTGGACACTTTGCTGGTTGTGTCTTTGATGGTGATGCAGTTGTGGCTCACAAGACCTTTCACAGATATGTTGTGAGGGCCAAGGCTGGAAAGAAACAATCATCAAAAGATGCTTCTGGAAGGGCTGCACATTCTGCTGGTGCTTCACTTCGTCGTCATAATGAACTTGCATTAAAAAAGGAAGTTCAAGAACTGCTTACTTCTTGGCGACCTTATTTTGATGCTTCCAAATGCATTTTTATAAATGCACCTTCAAGTAGTCGTCAATTGTTCTATAATGGAGAAAAATCACTCTTTTCCAATCCGCATTGTGCTATCAGAAATATTCCTTTCACTGTTCGGAGGCCTACTTTTAGGGAAGCAAAACGTGTATATAGCCAGTTGACTCAAGTATCCTTTGAAACGGATGAGAAGGAAACATTACAAAGCAACCAAGAGGGCTTAATATCAATTCCAACTGCTGTAAGAAATACAGACCTACTCTCCAGCGAAGGGGACATGATTGAGTTGGATAACAAAGATGAGGCTAAAGCTAGTTCAAGCAAAAAGGATGCACAACCTGTTTTGAGTGATGAAGAGAGTGAGAATGAGCTACCTGGCATATCAACTCCATTACATCAAGCAGCAAAATCTGGAGATGCTCACAATGTCATGGAACTCCTGGAACAGGGCTTGGATCCTTGCATTAAAGATGAAAGGGGGCGGACTCCATATATGTTGGCTAATGAGAAGGAAGTCAGAAATATTTTTAGAAGGTTCATGGCATCAAACCCTGACAAATGGGATTGGCATGCTGCAAAAGTTCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAACAGGCAGAAAAAGAAGCCAAGAGAAAAGCCAGAGCAAAAGAGTTAAAGAAACTAAAGAAAGCCAAAGAAAAGAGGGCACAGGCAGAAGCTGCGTTGCTTAAGAATGACTCGAAGGCTGCAGAGAAGCAAATGACTGCCCCAGCTTCTTCTAAGGGACAATCACAATCCAAAAGTGGTGTGAAAATATCTAAAGAGGAGGAAATAAGAAGAGCGCAGGCTGAAGAAAGAGAAAAGAGAGCAGCTGCCGCAGAGAGAAGAATAGCTGCCCTCAAAATTCAAGAGAACTGTTCAACCTCCACACATGCCATTTCAGAACCTAAAGGAGGATTAGCTGGTGAAATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGCTATAATTATAATTACTGCAGCACATCATGCATGCACGTACACAGGGAGTTCCTAGAAGATGGATGA 2001 0.4323 MASNLPTIAAATARSAATTTSFQEKHHRSVFELSPSVFDSCYFLPSTHSSIYEPNDNDRRNVGLETPSNNVIADGPQDTVVSAPRWTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTVAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDSDSENESQNRNEVRDKSREILKQKLFVGLQSGQSVSLWKCLIMNMSDENGSAENEVCERLKSLILEPRDNSHLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEVQELLTSWRPYFDASKCIFINAPSSSRQLFYNGEKSLFSNPHCAIRNIPFTVRRPTFREAKRVYSQLTQVSFETDEKETLQSNQEGLISIPTAVRNTDLLSSEGDMIELDNKDEAKASSSKKDAQPVLSDEESENELPGISTPLHQAAKSGDAHNVMELLEQGLDPCIKDERGRTPYMLANEKEVRNIFRRFMASNPDKWDWHAAKVPSALTKEMEESQAAKQAEKEAKRKARAKELKKLKKAKEKRAQAEAALLKNDSKAAEKQMTAPASSKGQSQSKSGVKISKEEEIRRAQAEEREKRAAAAERRIAALKIQENCSTSTHAISEPKGGLAGEIYCSCCNSSLAGKVPFHRYNYNYCSTSCMHVHREFLEDG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01754 666 Coils Coil 578 607 - -
Adu03g01754 666 Coils Coil 503 557 - -
Adu03g01754 666 MobiDBLite consensus disorder prediction 143 166 - -
Adu03g01754 666 MobiDBLite consensus disorder prediction 402 441 - -
Adu03g01754 666 ProSiteProfiles Ankyrin repeat region circular profile. 434 463 - -
Adu03g01754 666 Gene3D - 416 545 IPR036770 -
Adu03g01754 666 MobiDBLite consensus disorder prediction 402 421 - -
Adu03g01754 666 MobiDBLite consensus disorder prediction 529 587 - -
Adu03g01754 666 Pfam Bacteroidetes VLRF1 release factor 226 365 IPR041175 -
Adu03g01754 666 SUPERFAMILY beta-beta-alpha zinc fingers 83 118 IPR036236 -
Adu03g01754 666 ProSiteProfiles Ankyrin repeat profile. 434 463 IPR002110 GO:0005515
Adu03g01754 666 SUPERFAMILY Ankyrin repeat 434 488 IPR036770 -
Adu03g01754 666 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 23 661 - -
Adu03g01754 666 ProSitePatterns Zinc finger C2H2 type domain signature. 88 110 IPR013087 -
Adu03g01754 666 Pfam Vms1-associating treble clef domain 629 661 IPR041540 -
Adu03g01754 666 MobiDBLite consensus disorder prediction 556 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01754 Adu-Chr3 29793199 29800648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01754 25 613 C2H2 Transcription Factor Family AT1G01930 54.844 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01754 K26089 - gmx:100527709 823.928