Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01692 ATGTTGATAACGGTCAGGGATGCTTCCTTTTCTTCTCCACTCTGTTCTTGGCACCGTCGTTTCAGCACAAAACTCAAATATTCAATTTTCCGAGCGAGTTTTTCTGTCCAGAGGACACCCAACACTACCCTCACATGGAATCCCAGGCATGTCTCCACCTGCTATGATGCATCGAATTTCGATCCCTTGGGTATTAACCCGGATTTATCTTCCCGGTTAAATTCTACTTGGGAGAATGTAGTCTCCTTGTTTTCGCAAACTTTTGAGAGTGCTTCAAGTACAGACAAGGAAAAGCCTAATTCTTCACGAGGAATAGCAGCTGCTATAGAGGATAGTTCAATTGATTTTGGAGATTTCTTTAAAGGTCCATTGCCAGGAAAGTTTCTCAAGCTTTTAGGGTTTCTTGCCTTGTCACGTCTTGGTGTGTATATTCCTCTAGGTGGGGTTAATAGGGAGGCTTTTGTTGGAAATTTAGATCAGAATAGTTTGTTAAGCACTCTGGACTCGTTTTCTGGAGGCGGTATTGGTAGGCTTGGGATATGTTCCCTTGGTATTGTTCCCTTCATCAATGCACAAATTGTTTTCCAGCTTCTTGCACAGGTATATCCAAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAGTTCTTCAATACACTCGATATGCCTCAGTTGGATTTGCAATTGTACAGGCAATTGGCCAAGTCCTCTTTTTACGTCCTTATGTGAATGACTTTAGTACCGAGTGGGTTCTTTCATCTATTATCTTGTTGACTCTTGGCTCTGTGTTTACAACATACATCGGTGAACGAATCACAGACCTAAAACTCGGCAATGGCACCTCTCTTTTGATATTTACAAACATTATCTCTTACTTGCCAGCTTCTTTTGGTCGAACAATTGCACAGGCATTTAACGATGCTAATTATATTGGACTTGCTACCATCATTGTGTCCTTCTTTTTGTTGGTAGTTGGTATTGTCTATGTTCAGGAAGCAGAGAGAAAAATTCCTCTTAACTATGCTTCAAGATTCACTAGCAAAACCAGAGGACTTGAAAAATCTGCCTACTTACCCTTTAAGGTAAATAGTTCTGGGGTAATGCCCATCATATTCTCTACATCATCATTAGCTCTTCCCGGTACTTTAGCACGCTTCACTGGTTTGAATGCATTGAAGCAAACTGCAGTAGCTTTGAACCCAGGGGGTATGCTGTTCATTTATAACTGGATTTATGTAGCATCTTATTTAGACTTGAAATGTCGGATTCTGTATATTCGACTGCTAAATGCTCGCATTTCTTGCATTATGAAACTGCTTTTAGATAACTGTTTGTACGAATGTCGGAAGAGATCTGGGTATTTTTGTCATGCATTGGTAAAGTGGAAGCTTATCATGTTGTGCTACCCTTGTTTTGTCTCAGATATTGATTCGTACGTTATAACTGGACTTTCTATTGCAGGCTCCTTCTATGTTCTATTTAACATACTTTTGATTGCCTTCTTCAATTACTATTACACCTTCCTACAATTGGATCCTGATGATGTGAGTGAGCAATTGAAACGACAAGGTGCTTCAATTCCACTTGTCAGACCTGGCAGAAGTACAGCTGCATTTATCAAAACAGTTCTTAGTCGAATATCAGTTCTGGGTTCAACGTTTCTGGCTATTTTGGCTGCTGGTCCAGCAGTTGTTGAGCAGACAACGCACTTGACTGCATTCAGGGGATTTGCAGGAACGTCGATTCTTATTCTTGTTGGTTGCGCAACAGATACGGCTAGAAAAGTTCAAGCTGAGATCATATCTCAGAAGTACAAGAACATAGAATTCTATGATTTCGACAAGTACTGA 1863 0.4047 MLITVRDASFSSPLCSWHRRFSTKLKYSIFRASFSVQRTPNTTLTWNPRHVSTCYDASNFDPLGINPDLSSRLNSTWENVVSLFSQTFESASSTDKEKPNSSRGIAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLSSIILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFNDANYIGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRFTSKTRGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLNALKQTAVALNPGGMLFIYNWIYVASYLDLKCRILYIRLLNARISCIMKLLLDNCLYECRKRSGYFCHALVKWKLIMLCYPCFVSDIDSYVITGLSIAGSFYVLFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTAAFIKTVLSRISVLGSTFLAILAAGPAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01692 620 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 485 618 - -
Adu03g01692 620 PRINTS Preprotein translocase SecY subunit signature 252 277 - -
Adu03g01692 620 PRINTS Preprotein translocase SecY subunit signature 278 301 - -
Adu03g01692 620 PRINTS Preprotein translocase SecY subunit signature 220 243 - -
Adu03g01692 620 PRINTS Preprotein translocase SecY subunit signature 178 198 - -
Adu03g01692 620 PRINTS Preprotein translocase SecY subunit signature 369 388 - -
Adu03g01692 620 PRINTS Preprotein translocase SecY subunit signature 128 146 - -
Adu03g01692 620 Hamap Protein translocase subunit SecY [secY]. 116 613 IPR026593 -
Adu03g01692 620 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 127 609 IPR002208 GO:0015031|GO:0016020
Adu03g01692 620 ProSitePatterns Protein secY signature 1. 179 198 IPR030659 -
Adu03g01692 620 Gene3D SecY subunit domain 119 436 IPR023201 -
Adu03g01692 620 Gene3D SecY subunit domain 459 609 IPR023201 -
Adu03g01692 620 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 47 416 - -
Adu03g01692 620 Pfam SecY 180 596 IPR002208 GO:0015031|GO:0016020
Adu03g01692 620 ProSitePatterns Protein secY signature 2. 271 288 IPR030659 -
Adu03g01692 620 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 47 416 IPR002208 GO:0015031|GO:0016020
Adu03g01692 620 SUPERFAMILY Preprotein translocase SecY subunit 120 417 IPR023201 -
Adu03g01692 620 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 485 618 IPR002208 GO:0015031|GO:0016020
Adu03g01692 620 SUPERFAMILY Preprotein translocase SecY subunit 490 603 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01692 Adu-Chr3 28121982 28126178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01692 488 620 Chloroplast and Mitochondria Gene Families AT2G18710 88.722 1.62e-72 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01692 K10956 - gmx:100810430 647.506