Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01683 ATGGGAGTTCCGGAGAAGGATCCTCTTTCTCAATTGAGCTTACCTCCTGGTTTTAGATTTTACCCCACAGATGAGGAGCTTCTTGTTCAGTACCTATGTCGCAAGGTTGCTGGCAACCATTTCTCACTTCCTATCATCGCGGAAATCGATTTGTATAAATTCGACCCTTGGATCCTCCCAGGTAAAGCAATATTTGGGGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAGTATCCGAACGGTTCGCGACCGAACAGGGTTGCTGGCTCTGGGTACTGGAAAGCCACAGGAACAGATAAAGTAATCACTACCGAAGGCAGAAAAGTTGGAATCAAGAAAGCACTTGTTTTCTACATTGGCAAAGCACCCAAAGGCACCAAAACAAACTGGATCATGCACGAGTACCGTCTCCTCAACGGTTCTCAAAAGAGCCTCGGCAGCACCAAGGTACAACATTATTCCATCAGAAGTATTATATATCATTTAAAAAATATATTTTCAATGAGTATTAACATTTGTTTTATGAATATTGGTGTTTTGCAGCTAGATGATTGGGTTTTGTGTCGGATATACAAGAAGAACTTGAGCTCATCGCAAAAAGTCAATATGCCAAGCTTTACGAGCAAAGAATGGAGCAATGGATCGTCTCCTTCTTCATCGTCTCACATCGACGACATGCTCGAATTGCCGGAGATCGACGACCGGTGCTTCGCCTTACCGCGGGTTAACTCGCTGCAGCACGAGGAAAAGCTCACCCTTGGCGCCACAGGCAATAATTTCCCGGACTGGGTCAACTCGGGGGGTCTCGACTCGGTCCCTGAGTTCGGGAGCCAAACTCAGGGGATGACAAGTTACGATGGAAATGACCTATATGTCCCCTCCGCGTCACAGTTCTGCCACGTCAACACAATGGTTGTGCCGGGTAACCCGACGGAGGAGGAAGTCCAGAGCGGCATCAGGACCCAGCGGATTGATGAGAATTTCGGGTTATTTCAACAGAATTCGAATGTATTCACCCACCGGTATTTGTCGAGTTCGGGTGACTCATTCGGATTCGGATACCCGAATCAGCAATTTGGATTCGGATTCAGAGAATGA 1104 0.4683 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGNHFSLPIIAEIDLYKFDPWILPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLNGSQKSLGSTKVQHYSIRSIIYHLKNIFSMSINICFMNIGVLQLDDWVLCRIYKKNLSSSQKVNMPSFTSKEWSNGSSPSSSSHIDDMLELPEIDDRCFALPRVNSLQHEEKLTLGATGNNFPDWVNSGGLDSVPEFGSQTQGMTSYDGNDLYVPSASQFCHVNTMVVPGNPTEEEVQSGIRTQRIDENFGLFQQNSNVFTHRYLSSSGDSFGFGYPNQQFGFGFRE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01683 367 Gene3D NAC domain 23 199 IPR036093 GO:0003677|GO:0006355
Adu03g01683 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 338 - -
Adu03g01683 367 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Adu03g01683 367 ProSiteProfiles NAC domain profile. 14 195 IPR003441 GO:0003677|GO:0006355
Adu03g01683 367 PANTHER NAC TRANSCRIPTION FACTOR 56 1 338 - -
Adu03g01683 367 SUPERFAMILY NAC domain 10 195 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01683 Adu-Chr3 27944785 27946430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01683 1 363 NAC Transcription Factor Family AT4G27410 51.697 1.82e-109 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu03g01683 NAM 6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01683 - - adu:107478293 648.662