Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01671 ATGTGTTTACTATTAAATGAAGCGCCTCTATTAGTTGATGCTGATGGTGAAGAAGATGATACTGAAGCTGTGGTGAAGTCAACAACACCCCATATGTTTTGCAAGACTCTTACTGCTTCTTACACTAGCACTCATGGTGGATTTCTAAATGATTACAATCAACAGAGGCCTTCACAAGAGCTTGTGGCGAAGGATTTGCATGGCCTTGAATGGAGGTTTAGACATATATACAGAGGGCAGCCACGGAGACATTTGCTCACAACTGGATGGAGTGCATTTGTGAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGTTATTCCTTAGGGGTGATGATGGAGAATTAAGACTAGGGATTCGTAGGGCTGCTCAGTTGAAGAATGGTTTGACAACTCTTTTACTTAGAGATAGTTTCCTTTCCAGTTTCTTGATGGCTTCAGTACAATTTATGTTGTGTATAAAGCAAGAATGGTGA 474 0.4114 MCLLLNEAPLLVDADGEEDDTEAVVKSTTPHMFCKTLTASYTSTHGGFLNDYNQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKNGLTTLLLRDSFLSSFLMASVQFMLCIKQEW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01671 157 Gene3D - 31 123 IPR015300 -
Adu03g01671 157 Pfam B3 DNA binding domain 33 122 IPR003340 GO:0003677
Adu03g01671 157 SUPERFAMILY DNA-binding pseudobarrel domain 26 127 IPR015300 -
Adu03g01671 157 SMART B3_2 33 123 IPR003340 GO:0003677
Adu03g01671 157 ProSiteProfiles B3 DNA-binding domain profile. 48 123 IPR003340 GO:0003677
Adu03g01671 157 PANTHER AUXIN RESPONSE FACTOR 3 13 134 - -
Adu03g01671 157 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 134 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu03g01671 157 CDD B3_DNA 31 121 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01671 Adu-Chr3 27640097 27640735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01671 3 143 B3 DNA Binding Superfamily AT5G60450 59.477 4.66e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu03g01671 B3 9.7e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01671 K14486 - tcc:18596775 213.772