Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01670 ATGTTGTTATCGGCTTCGCCATCTTCTTTGGCGAAGAGCTCTCTGGAAGAGATGCTCGATTCTCTTCGTCGGAAAGAGGAAGAGGAAGCAAAGCCGAAGGACTTGCCTCCGGCATTGCCGGCACGGCCGGCCTCCCGTGCACGGCTGCCTCCGGCGAGGCGGTCTTTGCCGAATAATTTTAAGGTCGGAGACGGCAGTAACGCCATGCCGGAGTGCTTGCCGAATGGGTTTGATTGTAAGAGGAAGGAAGATGAGCTGGGAGAGAAGAGAAGAAGTGATGGTTTTGGGAGCAAGAAGGTGAAGATGATGATGGATGCAGATTCCCCTTATTTAGCTTCGTCTGGGAAGATTAGGGAATTGGAGGATGATAACATTTCTTACATTATCAAAAAGAAGCTTTGTGTCTGGTGTAGACAACCAAGTGGACTGTGGGAACTAGACGATCTTATGAAGCTCTGTTATTTGAATGAGCCATCAGTTCTTCACAATATTAAGTTCAGACATTCTCAGGACATGATTTATactaaagcaggtcccgttttaattgcagtcaatcccttcaaagatctccagatttttggaaatgatcgtatttcagcttataagcagaaaTTTACCAATAGTCCTCATGTTTTTGCTGTGGCTGATGAGGCTTTTACGGAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCAAAGATTGCTATGCAGTACTTAGTTGCTGTTGGTGGTAGTAATAGGGGTACAGAAGAAAAAATTCTTCAAACAAATCATGTGCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATTGAAATTCATTTCAGCACAATGGGTAAAATCCATGGGGCTAAAGTTCAAACATGTAAGCTTGTTCAAGCTTTAGATTCAAGAGTTGTTCAGCTGGCCAGTGGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGGCCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGCTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTCGATATTGTCCAAATTTGCAAAGAGGACCAAGAGCTGATCTTTAAGGTGCTGGCTGCTATACTATGGCTGGGAAATATATCATTCAAAGTTGCAGACAGTGAGAATGACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCTCCCAGGCATTGAAGGCAGCATTATCTACCAAGAAAATCCAGCCTGAGAAGGATACTAATGCAAAAAAATTGATATTGCAGCAGGCAATTCAAACGAGAGACGAAATTGCAAAATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAATCAACAAGTCACTTCAAGTGGGTAAAAGATGTACTGGGAAATCCATAAATATCTTGGATATTACTGGTTTTGAATCATTCCAGAAAAGTAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACATCATCTCAATCGGCATCTGTTTAAGCAAGAGCAGGAGGACTACGAGTCAGATGGGATTGAGTGGACTAAAATATATTTTAAGGACAATCAAGAGTGCTTGGATCTCTTTGAGAGGAAACCTCACAGTCTACTCACCTTGTTGGATGAGGAATCAAATTTGCCTAAGGCTTCTGATCTAACGTTTGCAAACAAACTTAAGCAGCACTTGAGTACTAATCCTTACTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACGAATGGCTTTCTAGAAAAGAACAGAGATTTTATGCCTTCCGATTCCGTACAATTCCTTGCTTCATGTAAATGTGAACTGCTGCCATTGTTCTCCAAAATGTTTGATCAGTCTCTGAAGTGTTCAAATTCCTTCAGCACAGGTGCCGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATGCTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTATGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTACAATCATATGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAACGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGCAGGATATATCCAAAGAGCGGGTTCAGAACCTACCTTCACCATTAGCCCAACTACAAAGGCGAGTTGACAAGGCCGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATACGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCCTTGCAAATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAATCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTATGAAGATGCTAGCGTGGGATCTCGAACAGCTGTGAACACTCCGATAAAGTTTTCTAGCAATTTTGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAATGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTTGACGACGAAGTTAAAGCTCTGAATGAGGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 3432 0.4047 MLLSASPSSLAKSSLEEMLDSLRRKEEEEAKPKDLPPALPARPASRARLPPARRSLPNNFKVGDGSNAMPECLPNGFDCKRKEDELGEKRRSDGFGSKKVKMMMDADSPYLASSGKIRELEDDNISYIIKKKLCVWCRQPSGLWELDDLMKLCYLNEPSVLHNIKFRHSQDMIYTKAGPVLIAVNPFKDLQIFGNDRISAYKQKFTNSPHVFAVADEAFTEMMRDEANQSIIISGESGSGKTETAKIAMQYLVAVGGSNRGTEEKILQTNHVLEAFGNAKTSRNENSSRFGKLIEIHFSTMGKIHGAKVQTCKLVQALDSRVVQLASGERSYHIFYQLCAGSSFGLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDQELIFKVLAAILWLGNISFKVADSENDIEVLDDEAVTSAARLMGCSSQALKAALSTKKIQPEKDTNAKKLILQQAIQTRDEIAKFMYENLFNWIVDQINKSLQVGKRCTGKSINILDITGFESFQKSSFEQFCINYANERLQHHLNRHLFKQEQEDYESDGIEWTKIYFKDNQECLDLFERKPHSLLTLLDEESNLPKASDLTFANKLKQHLSTNPYFKGERGRAFSVRHYEGEVLYDTNGFLEKNRDFMPSDSVQFLASCKCELLPLFSKMFDQSLKCSNSFSTGAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNAKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFMLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATLQSYVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKQDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSGNTQSTRNEVLSPRYYGYEDASVGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTNGTLSSLMKEFDQRRQNFDDEVKALNEVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01670 1143 MobiDBLite consensus disorder prediction 1 67 - -
Adu03g01670 1143 SMART MYSc_2a 138 818 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 868 IPR027417 -
Adu03g01670 1143 Gene3D - 821 868 - -
Adu03g01670 1143 ProSiteProfiles IQ motif profile. 878 906 IPR000048 GO:0005515
Adu03g01670 1143 ProSiteProfiles IQ motif profile. 821 848 IPR000048 GO:0005515
Adu03g01670 1143 PANTHER MYOSIN-2 ISOFORM X1 137 1141 - -
Adu03g01670 1143 Gene3D - 330 386 - -
Adu03g01670 1143 Gene3D Myosin VI head, motor domain, U50 subdomain 387 495 - -
Adu03g01670 1143 Pfam Myosin head (motor domain) 147 805 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 PANTHER MYOSIN 137 1141 - -
Adu03g01670 1143 ProSiteProfiles Myosin motor domain profile. 144 817 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 ProSiteProfiles IQ motif profile. 842 870 IPR000048 GO:0005515
Adu03g01670 1143 Coils Coil 940 981 - -
Adu03g01670 1143 SMART iq_5 818 840 IPR000048 GO:0005515
Adu03g01670 1143 SMART iq_5 841 863 IPR000048 GO:0005515
Adu03g01670 1143 SMART iq_5 877 899 IPR000048 GO:0005515
Adu03g01670 1143 MobiDBLite consensus disorder prediction 1 15 - -
Adu03g01670 1143 PRINTS Myosin heavy chain signature 271 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 PRINTS Myosin heavy chain signature 559 587 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 PRINTS Myosin heavy chain signature 228 253 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 PRINTS Myosin heavy chain signature 506 534 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 PRINTS Myosin heavy chain signature 174 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g01670 1143 Gene3D Kinesin motor domain 145 750 IPR036961 -
Adu03g01670 1143 Gene3D - 518 707 - -
Adu03g01670 1143 CDD MYSc_Myo8 158 805 IPR036022 -
Adu03g01670 1143 MobiDBLite consensus disorder prediction 17 35 - -
Adu03g01670 1143 Coils Coil 1113 1133 - -
Adu03g01670 1143 Gene3D - 751 818 - -
Adu03g01670 1143 Pfam IQ calmodulin-binding motif 880 897 IPR000048 GO:0005515
Adu03g01670 1143 Pfam IQ calmodulin-binding motif 823 840 IPR000048 GO:0005515
Adu03g01670 1143 Coils Coil 1068 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01670 Adu-Chr3 27612157 27622553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01670 1 1140 Myosins gene family AT5G54280 54.935 0.0 1292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01670 K10357 - gmx:100819335 1421.76