Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g01650 | ATGCTATTTGTTTGGCTCTTTGTTATCTCTTTTGTTAAACTCTCCACTTCACAACATACATTGACGCCGCGTCACTTTGTCCGTGACGGCGAGACTTTGCTTTCCCGTGATGGAACATTTGAGCTTGGTTTCTTCAGCCCTGGAACTTCTACAAATCGATATCTTGGTATATGGTACAGGAATGTGTTCCCAAAAGCAGTTGTGTGGGTGGCCAACCGCGAATCACCAATCAAGAACAATTCAGGAATCTTGACCATCAACAATGAAGGAGTTCTTGTGATCCTTGTGATTCTCATCAACGGCACAAACAGCAGCAGCCCTGTTTGGTCTTCTAATGTGCCAAGCGAAGCGGTTATTAATCCAATAGCACAGCTTCTGGAGACAGGGAATCTTGTGGTGAAGAATGGAGTTAAAGATTCAAACAACAATCAGTTTCTCTGGCAGAGTTTCAACTACCCTGGCGATACGCTTACCATGCAGGGCATGAAGCTTGGATGGAACTTAATGACAGGTCAAGAAATATTCCTTTCTTCTTGGAGAAGTAAGGATGATCCAAGCCAGGGAGAATATTCATTAAAGATTGACCGTATGGGATATCCACAACTTTTTAAGTATAAAGGTTCTGAAAAAAGGTTTAGAATAGGGTCATGGAATGGAGAAAGTTTTAGTGGATATTCATCTCATCAACTGAAACAAAATATTAGAGTAGAGTTCATCATGAATCATAAAGAAGTGTATCTAGTATTTAAAACCGTCGATAGATCAGTTACCTGGATTTATACAGTTACATCTTCGGGCCATGGAGAGCTTTCTGCTTGGACGAGTCAATCCAATAGCCGAAAAGTCATCTCGACCGGGGAGGAAGATGAATGCGAAAATTATGCCTTGTGTGGTGTTTATTCTGTGTGCAATATGAATGGTAATTCTCCTACATGTGAATGTCTCAAAGGATTTGTTCCCAAGTTTCCAGAACAGTGGAATATGTCATATTGGTCTAATGGTTGTGTTTCAAGGACGGAATTGGATTGTGATAAGAACACACATGGCTTCTTTAAGTACACAAACATGAAAGTGCCAGACACGTCTTCGTCGTGGTTTAGCAAGGCCATGAACCTTGATGAATGTCGGAAGAAGTGTCTGGAAAACTGTTCTTGTACGGCGTATGCCAATTTAGACATTCGCAGAGGAGGAACCGGTTGTCTACTCTGGTTTGGAGCTCTGATTGACACGAGGACGTTTTCTCAATGGGGACAAGACCTTTACATCAAGGTCCCTGCTTCTCAACTCGATAATGGCCGCAGAAAGAAGATGATGCTAATAATAGGAATAACAGTTGGTGGGATTATTTTTGGATTAACATGTGCCTGCGCATTGATACTCAGAAAGCGAGGGGTAGCAAGATTTATTTACAGGAAGCATTATGAAAGTATACTGAAAAAAGAAGAGATTTATCTACCAACATTTGACTTTTCAGTCATTGTTAAAGCCACTCAAAACTTCTCAAGCTGTAACAAACTAGGTGAAGGTGGTTTCGGACCAGTATACAAGGGCACATTGACAAATGGTCAAGAGTTAGCTGTGAAAAGGCTTTCGAAAAATTCTGGACAAGGATTGGAAGAGTTTAAAAATGAAGTGGTGTTGATAGCTAAACTTCAGCATCGTAATCTTGTAAAGCTTCTTGGATGCTGCATAGAGGAAGAAGACATAATGTTGATCTATGAATATATGCCCAATAAAAGCTTGGACAACTTTATTTTCGATGAAACTAGAAGGCACCTGCTGGAATGGCCTAAGCGTTTCAATATTATTTGTGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGGTTAAGAATTATTCATAGAGATCTAAAAACCAGCAATATTCTACTTGATGCAAATCTGGATCCAAAAATATCTGATTTTGGCTTAGCTCGAACGTTGTTAGGAGATCAAATTGAGGCAAATACAACTAAAGTTGCTGGAACATATGGGTATATGTCGCCGGAATATGCAGTGCATGGACAATTCTCAGAGAAATCAGATGTATTTAGTTATGGTGTAATAGTATTAGAATTGTTAAGTGGAAAAAGAAATAGAGATTTCTCAGATTCTGAAAACTACCATAATCTACTTGGACATGCATGGAGATTGTGGACTGAGGAGAAGCCATTGGAACTATTGGATGAAGTATTAAGGGAAAATTGCAACCCTTCTGAAGTCATAAGATGCATACAAGTGGGCCTACTATGCGTGCAACAAAGACCAGAAGATAGACCGAATATGTCATTGGTGGTTCTAATGCTAAATGGAGAGAAAATGTTGCCCAAACCAAATTTTCCTGGATTTTACATTGATAGAGGTGTTCAACTTCAAGCAGATTCTTCATTGCCGAACAACACACTCTTTTCAGCTAACCAAATTTCGATAACAATATTAGAAGCTAGATAG | 2457 | 0.3956 | MLFVWLFVISFVKLSTSQHTLTPRHFVRDGETLLSRDGTFELGFFSPGTSTNRYLGIWYRNVFPKAVVWVANRESPIKNNSGILTINNEGVLVILVILINGTNSSSPVWSSNVPSEAVINPIAQLLETGNLVVKNGVKDSNNNQFLWQSFNYPGDTLTMQGMKLGWNLMTGQEIFLSSWRSKDDPSQGEYSLKIDRMGYPQLFKYKGSEKRFRIGSWNGESFSGYSSHQLKQNIRVEFIMNHKEVYLVFKTVDRSVTWIYTVTSSGHGELSAWTSQSNSRKVISTGEEDECENYALCGVYSVCNMNGNSPTCECLKGFVPKFPEQWNMSYWSNGCVSRTELDCDKNTHGFFKYTNMKVPDTSSSWFSKAMNLDECRKKCLENCSCTAYANLDIRRGGTGCLLWFGALIDTRTFSQWGQDLYIKVPASQLDNGRRKKMMLIIGITVGGIIFGLTCACALILRKRGVARFIYRKHYESILKKEEIYLPTFDFSVIVKATQNFSSCNKLGEGGFGPVYKGTLTNGQELAVKRLSKNSGQGLEEFKNEVVLIAKLQHRNLVKLLGCCIEEEDIMLIYEYMPNKSLDNFIFDETRRHLLEWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARTLLGDQIEANTTKVAGTYGYMSPEYAVHGQFSEKSDVFSYGVIVLELLSGKRNRDFSDSENYHNLLGHAWRLWTEEKPLELLDEVLRENCNPSEVIRCIQVGLLCVQQRPEDRPNMSLVVLMLNGEKMLPKPNFPGFYIDRGVQLQADSSLPNNTLFSANQISITILEAR | 818 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g01650 | 818 | CDD | B_lectin | 24 | 153 | IPR001480 | - | |
Adu03g01650 | 818 | SUPERFAMILY | Protein kinase-like (PK-like) | 483 | 784 | IPR011009 | - | |
Adu03g01650 | 818 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 18 | 815 | - | - | |
Adu03g01650 | 818 | SMART | serkin_6 | 500 | 769 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu03g01650 | 818 | ProSiteProfiles | EGF-like domain profile. | 287 | 324 | IPR000742 | - | |
Adu03g01650 | 818 | SMART | blect_4 | 24 | 153 | IPR001480 | - | |
Adu03g01650 | 818 | Gene3D | - | 12 | 151 | IPR036426 | - | |
Adu03g01650 | 818 | Gene3D | Phosphorylase Kinase; domain 1 | 474 | 575 | - | - | |
Adu03g01650 | 818 | Pfam | PAN-like domain | 343 | 410 | IPR003609 | - | |
Adu03g01650 | 818 | Pfam | S-locus glycoprotein domain | 212 | 322 | IPR000858 | GO:0048544 | |
Adu03g01650 | 818 | SMART | ntp_6 | 345 | 424 | IPR003609 | - | |
Adu03g01650 | 818 | Pfam | Protein tyrosine and serine/threonine kinase | 503 | 768 | IPR001245 | GO:0004672|GO:0006468 | |
Adu03g01650 | 818 | ProSiteProfiles | Bulb-type lectin domain profile. | 18 | 146 | IPR001480 | - | |
Adu03g01650 | 818 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 18 | 815 | - | - | |
Adu03g01650 | 818 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 67 | 185 | IPR036426 | - | |
Adu03g01650 | 818 | CDD | PAN_AP_plant | 339 | 425 | - | - | |
Adu03g01650 | 818 | Gene3D | Transferase(Phosphotransferase) domain 1 | 576 | 779 | - | - | |
Adu03g01650 | 818 | ProSiteProfiles | PAN/Apple domain profile. | 343 | 425 | IPR003609 | - | |
Adu03g01650 | 818 | Gene3D | Hepatocyte Growth Factor | 343 | 421 | - | - | |
Adu03g01650 | 818 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 621 | 633 | IPR008271 | GO:0004672|GO:0006468 | |
Adu03g01650 | 818 | CDD | STKc_IRAK | 506 | 773 | - | - | |
Adu03g01650 | 818 | Pfam | D-mannose binding lectin | 67 | 180 | IPR001480 | - | |
Adu03g01650 | 818 | ProSiteProfiles | Protein kinase domain profile. | 500 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu03g01650 | 818 | PIRSF | SRK | 1 | 818 | IPR024171 | GO:0004674 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g01650 | Adu-Chr3 | 27113048 | 27146074 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g01650 | 488 | 803 | Receptor kinase-like Gene Family | AT4G23140 | 57.716 | 1.40e-126 | 393 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Adu03g01650 | PK_Tyr_Ser-Thr | 4.3e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g01650 | - | - | gmx:100790261 | 1089.33 |