Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01642 ATGTATGATGTTTTTCTGAACTTTAGAGGCGCAGATTCAAGGTTCCTGTTCACAGACTATCTGTATCATGGACTTGCCGACGTAAAAAAACTGGAGGTATTCAGAGATGATCCGGGTCTGGAACTAGGAGACGCAATTAAAGCTACTCTGATGGAAGCCATTAAAAGATCAAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCCGGTGGTGCCTACTAGAACTACAGCAGATGCTCAAGTTTGGAAAGAAAGGGTCCGTTATCCCAATTTTTTATCGCGTGGAGCCGTCAGAAGTGAGATTTAGCGACAAATCTAAGGAAGCCATGAAGAAACATGAAGAGAGATACGGCAAAGACACGGCGGACGCGTGGAAGTCGGCTCTATCTATAGTTTGCGGGCTAAGCGGGGAACACATTTTTTGTGTTGAGAAATCACAGAAGTATGAAACTGGGGTCATTGGCAAGATTGTTGAACAAGTCTCTGCAAAACTTCTAAAGATCAAGCAACAAATAAATAGATTTGATTCTCAATTTGAAGAGGTTGAATCACTTTTGAACCTTGAATCTCATGATACTACTGTTCGTATGGTGGGAATTTATGAAGATCCTAAAATAGGCAAAAGTTACATAACAACATTTGCCTTTGAGCTATACTATAAGATCAAATATAAGTTCCAAGCGGCAGGTTTTCTTGTCAATGTTAGTAAACAGCTAATGAAAATCACCGATAATCTCTTGGAAAATCTCCAAAAGGAGCTTCTTTCTGATATGGATGTGGAGACCATGCAGGAATTGGAGCATAAAAAAATGCTTCTGGTTCTGGAAGGGGTTGATAATAAAGATCATTTGGAGTTGCTAGTGGGAATGGGAATAGGTGATTGGTTTGGTCGTGGTAGTAGGATCATCATAGCAACAGAAAACAGATATCTTTTTCGTTATTGTCCTCCTGTGATGAATGGTGTTAAGCTTGAGAAACATTGCATACATGAAGGTGAATTGGTGAAGGAAAAAATTGTGAAGGAAAAGAATGTAGTGGGATTTGTAAAGGATTTCATTGATGTAATTAATCAACTGAGGGAAGAAGATTCAAAGGGGAGGAATGTCGTTTCCATTGTTGGCATGGGAGGATCAGGCAAGACCACCCTTGCCCGAAAGATCTTCGATAGCAAATTGGTCACTGAGCTATTCCCTTACCGTGCATGGGTAATTGTTTCCAAAGATTATAGAGAAAATGAAGTTTTCTTAAGCCTTCACCGCTCTTTGATGCCATCCACCACACCTATACCTAATAATGAAGAGGTTTTAAAGGCAAATGTGAGAAAATATTTGAATCGGAAAAGGAGAAAGTATTTGGTAGTTCTAGATGATGTGTGGGATACTCAAGTGTGGGACAAGATAAAGGATTATGTTCTCCCAGATAACAATAATGGAAGCAGGATATTGGTGACTACACGAAATCATCAGGTGGCAAACTATGCAAGGTCAAAGGAGCCTCACCATGAACTTAGCCGTTTGAATGAAGAAGAAAGTTGGGAATTGTTTTGCAGTTACGTGTTTTGTGGAGAAGAATGTCCCCCTGATTTAGAGCCTATTGGTAAATCAATTGCTGAAAGTTGCAAGGGTTTACCATTGGCTATCAAAACCACAGCTGGAATTGTGGCAAAGCGAGAGAGATCACAAGATGCATGGCAAAAAATCAAGAACCTGATCCCTTATTGGCGTGTTGCTGAAGACAAGGATGGTAAGAAGATGATGGAGATATTGAAGCTTAGCTACGATGATCTGTATGAGAAAATGAAGCCATGCTTTTTATATCTTGGAGTGTTTCCTGAAGATGAAGAGATTTGGGTGAGAGACTTAATCCATCTATGGATAGCAGAAGGGTTCATAGAACCAATCCAAACTGGAAGATCAAAAGCACCACCCCCAGAACCTGAAGATATTGGTGAGCAATACTTGAAGGAGCTAGTGGACCGTAACTTGGTACAAGTGACCAGTAGGAAGAGTGATGGCAAAGGCGTGAAAACATGTCGGATCCATGATCTCATCCGAGAACTATGCATATCAGTGAGTAATAACAGTAACAATGCTCGTAGGTTGTCCTTTCCCAATGATGTAGGATCCTATGCATGTTCAGTAACATGTAACCAATCAAGGACTTGTTCCTTGTTCGCTTATGGAGATATCGCGGGGTGGTCACATCATGTTCCAGAAGATTGCCAGGTTAATGTGCTATACTTGAAAGGAGTGGATTGGAATCTATCTAGCAAAGAGAATTCTGAGTATTTGATGAGGTTGAAAAGCCTCAGGTTCTTGAAAATGGATTATACTGCCCCACGCGGGTTATTTAATAAGCTTCAGAGTTTACAAACATTACGTGTACTGACCACTTTGGAGTATGAGAAAACCATTGATGAGGGGTTAAGGCATTTGAGACATCTTAGTTGTGCTTCTGGAGTGCATTTATTAGAAAAAGAAGGGGTTAAATATAAAATGCAAAATGTTCAAACTCTATGTGATGTGTATATGGATTCACGACTGGGGTTCTTACTCGACAATGGCTACTTTCCCAACTTGAGAACACTGGGTTTAATACCGATGAGTGAAGACCAAGGTCAATCATTGAGGAACTTGCACCGCCTAAGCAAGCTACATAAATTGAAATTACAGTTTGGGGTCTACTCTAGAAGGGTTCCATTAGATAAAATTACATTTCCGTCAAATCTTAGCAAGATTACCTTGTCATGGTTTGAGGATTTAAAGTACCAAGACATGAATGCTTTGGGACAAATTCCCAGCCTTCAAATTTTAAAATTATATCAAGTGAAATGTACCAAAAAAGCCCTTAATTGTGGTGGTGCTGGGAGCTTTCCGCAGCTTCAAGTTTTTATCATGATATCAGTGAAGGTCACACGTGTTACATTAGAAGACGCTGCGATGCCTTGCCTTCAACGTGCGCTCTTTCGTGAGTGTCGTGGCTTGAAGTCCAAGTACCTTCCTGAACGAATGCTTTCCTTGGTATTGGATGTCAATGTCACAGCTTTTCCAAAAGCAGAACTCTCCTCCATAATACATACATCATTTCATGATGTGCTCCTGCAGCCTCATTGTATTGCAATGGAGTAG 3135 0.4032 MYDVFLNFRGADSRFLFTDYLYHGLADVKKLEVFRDDPGLELGDAIKATLMEAIKRSRIHIVVMSENYVSSRWCLLELQQMLKFGKKGSVIPIFYRVEPSEVRFSDKSKEAMKKHEERYGKDTADAWKSALSIVCGLSGEHIFCVEKSQKYETGVIGKIVEQVSAKLLKIKQQINRFDSQFEEVESLLNLESHDTTVRMVGIYEDPKIGKSYITTFAFELYYKIKYKFQAAGFLVNVSKQLMKITDNLLENLQKELLSDMDVETMQELEHKKMLLVLEGVDNKDHLELLVGMGIGDWFGRGSRIIIATENRYLFRYCPPVMNGVKLEKHCIHEGELVKEKIVKEKNVVGFVKDFIDVINQLREEDSKGRNVVSIVGMGGSGKTTLARKIFDSKLVTELFPYRAWVIVSKDYRENEVFLSLHRSLMPSTTPIPNNEEVLKANVRKYLNRKRRKYLVVLDDVWDTQVWDKIKDYVLPDNNNGSRILVTTRNHQVANYARSKEPHHELSRLNEEESWELFCSYVFCGEECPPDLEPIGKSIAESCKGLPLAIKTTAGIVAKRERSQDAWQKIKNLIPYWRVAEDKDGKKMMEILKLSYDDLYEKMKPCFLYLGVFPEDEEIWVRDLIHLWIAEGFIEPIQTGRSKAPPPEPEDIGEQYLKELVDRNLVQVTSRKSDGKGVKTCRIHDLIRELCISVSNNSNNARRLSFPNDVGSYACSVTCNQSRTCSLFAYGDIAGWSHHVPEDCQVNVLYLKGVDWNLSSKENSEYLMRLKSLRFLKMDYTAPRGLFNKLQSLQTLRVLTTLEYEKTIDEGLRHLRHLSCASGVHLLEKEGVKYKMQNVQTLCDVYMDSRLGFLLDNGYFPNLRTLGLIPMSEDQGQSLRNLHRLSKLHKLKLQFGVYSRRVPLDKITFPSNLSKITLSWFEDLKYQDMNALGQIPSLQILKLYQVKCTKKALNCGGAGSFPQLQVFIMISVKVTRVTLEDAAMPCLQRALFRECRGLKSKYLPERMLSLVLDVNVTAFPKAELSSIIHTSFHDVLLQPHCIAME 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01642 1044 Gene3D Ribonuclease Inhibitor 736 1025 IPR032675 -
Adu03g01642 1044 Gene3D - 507 599 IPR042197 -
Adu03g01642 1044 SUPERFAMILY L domain-like 677 1003 - -
Adu03g01642 1044 Gene3D - 337 502 IPR027417 -
Adu03g01642 1044 Gene3D - 167 319 IPR027417 -
Adu03g01642 1044 PANTHER DISEASE RESISTANCE PROTEIN RP 342 1008 IPR044974 GO:0006952
Adu03g01642 1044 Pfam TIR domain 2 179 IPR000157 GO:0007165
Adu03g01642 1044 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 139 IPR035897 -
Adu03g01642 1044 PANTHER - 342 1008 - -
Adu03g01642 1044 PRINTS Disease resistance protein signature 447 461 - -
Adu03g01642 1044 PRINTS Disease resistance protein signature 542 556 - -
Adu03g01642 1044 PRINTS Disease resistance protein signature 371 386 - -
Adu03g01642 1044 ProSiteProfiles TIR domain profile. 1 167 IPR000157 GO:0007165
Adu03g01642 1044 ProSiteProfiles T-box domain profile. 560 676 IPR046360 GO:0003700|GO:0045893
Adu03g01642 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 609 IPR027417 -
Adu03g01642 1044 Gene3D - 1 166 IPR035897 -
Adu03g01642 1044 Pfam NB-ARC domain 356 597 IPR002182 GO:0043531
Adu03g01642 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 317 IPR027417 -
Adu03g01642 1044 Gene3D - 600 691 IPR036388 -
Adu03g01642 1044 SMART till_3 1 137 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01642 Adu-Chr3 26930670 26941179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01642 51 317 WRKY Transcription Factor Family AT4G12020 29.893 1.19e-19 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01642 - - aip:107637424 1119.38