Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01624 ATGAAGATCAATCCTTCTTTCTGGACTATCATTGTTTACACATTAGTTATTGCCACTCCCTTCTTTCATCATGAATCCAATGCAATGAACACTTCTATCATTACCCCAAACCTATGCCTCGGTGACGGCAAGACCATAGTTTCCAAAGATAAAGGAACCTTTGAACTTGGCTTCTTCACAAAATCCAACAAACGCTACCTTGGAATTTGGTACGCCAACATCACAATCCAAACCATTGTGTGGGTGGCGAACGGTGCCAACCCCATCAACGATTATTCCCCTGTTACCCCTCCCATTTTAGAACTTAAAAGTAATGGAAGCTTGGTTCTTACTCACAAGAACGTTCTTGTATGGCAAACAATCAGCAGTTCCCCGGCAACCGCAGTGCGGAATCCGGTGGCGGAGCTTCTTGATTCCGGCAATCTTGTGATAAGAGAGGACAATGACACAAATCCACAACGCTATTTGTGGCAGAGCTTTGACTACCCTTCGAATACAATGTTGGCAGGGATGAAACTGGGATGGGACATTAGAAGAAATTTCAACAGGAAGATCACAGCTTGGAAAACTGATGATAATCCAGCACCAGGTGACTTTTCTTGGAGTGTTATGCGGTACAACTACCCTGAAGTGTATATGACGAAGAGAAGAAGAAAGATGTACAGAATTGGACCCTGGAACGGCATGCGTTTCAGTGGCATGCCAGAACTGAGATCCAATCCAATATTTAATTTCAACTTCGTCTCCACTGCTGAAGAAGTTTACTACACATGGACCCTCAAGGACCCTTCTCTAACAACCATCGCAGTGCTTAACCAGAGCGCGGGCGGCCGCCCTCGCTACGTTTGGTCGGAGGCCGATGAATCGTGGAGGACTTATTCAACTTTGCCAGGGGACTATTGTGATACCTATGGACTGTGTGGTCCTAATGGATATTGTAGCATAACTGCATCACCAGTGTGTGAGTGTTTGGAAGGGTTTAAGCCCAAGTTTCCCAAAAAGTGGAACTCAATGGATTGGTCCCAAGGATGTGAAAGAAACCATTCAATAAGGTGCACTAGTAATGGTACCAATGAGGATGGTGATGGGTTTGTGCTTTTGCAGGGATTGAAAGTGCCAGATACTGAATATACTTTGGTGTATAAGGATATTGATTTGAATAAATGTAGAGCCATGTGCTTGGAAAATTGTTCATGCATGGCTTATACAAACTCAGATATAAGAGGAGGTGGTCAAGGCTGTGTCATGTGGTTTCATGATTTAATTGATATCAAACTGTTTCCTGATGGTGGACAGGAACTATACGTCCGACTGCGTGCTTCTGACTTGGGTGCTGAGCATACACAAAAGAGAATGAAAATAATAGTTGGAACCACTATTGCCGCAGCACTTATTTCGGTAACTACTTATTCTGCCTACAGATTCAGGAAAAAGATTGCAGAAAAGTCATCGAAGATAGAAGATAATTATGAAAGTTATGTAGATGATTTGGATCTTCCATTGCTTAATTATTCAACAATTATGGTTGCTAGTAATAACTTCTCAGTGAAGAATAAGATTGGAGAAGGTGGTTTTGGACCAGTATATTTGGGAAAATTAGCAAATGAACAAGAAGTTGCTATAAAGAGACTATCAAAGAGTTCAATACAAGGATTTTCTGAGTTCATAAATGAAGTTAAACTAATTGCAAAACTTCAACATCGAAATCTTGTAAAACTTATTGGTTGTTGCATTCAAGGACAAGAGAAGATGCTAGTTTATGAATACATGACCAACGGTAGCTTAGATTACTTCATTTTCGATCATAGCAAAGGAAAATTGCTAAACTGGCAAAAGCGCAATCACATAATAGGTGGAATCGCTAGAGGCCTTATGTATCTTCATCAAGATTCTCGACTGAGAATTGTACATAGAGATCTTAAAGCGAGTAATATTTTACTTGATCATAATTTAAATTCAAAAATATCAGATTTTGGAATGGCTAGACTTTTTAGAGGAGAGCAAAACGAAGAAAGTACAAATAAAATTGTTGGGACTTTTGGATACATGGCACCAGAGTATGTCCTTGATGGATTATTTTCGGTAAAATCTGATGTTTACAGTTTTGGCGTTTTATTGCTAGAGATTATAAGTGGGAAAAAGAATAGAAGATCTCATGCAAAGCAATCATCCCTTAACCTCATTGATCATACATGGGCACTGTGGAAAATGGGCAATGCTTTCCAAATAATTGACCCAAATATTGAAGACTCATGCATTGAATCTGAAGTATTGCGTTTCATCCATATTGCTCTATTGTGCGTACAACATTGTCCAGAAGATAGACCTAATATGACCTCAGTAGTTCTAATGTTAAGTAGTGAGATGGAATTGGATCAACCTAAAGAGCCTGGTTTTTTCACTAGGAGGAAAAATGTTGAAGCAAATTCATGTACAAGTTACCCAAGTTCAAATAATGAAATTAGCATAACCTTATTAACTGGCAGGTGA 2490 0.3956 MKINPSFWTIIVYTLVIATPFFHHESNAMNTSIITPNLCLGDGKTIVSKDKGTFELGFFTKSNKRYLGIWYANITIQTIVWVANGANPINDYSPVTPPILELKSNGSLVLTHKNVLVWQTISSSPATAVRNPVAELLDSGNLVIREDNDTNPQRYLWQSFDYPSNTMLAGMKLGWDIRRNFNRKITAWKTDDNPAPGDFSWSVMRYNYPEVYMTKRRRKMYRIGPWNGMRFSGMPELRSNPIFNFNFVSTAEEVYYTWTLKDPSLTTIAVLNQSAGGRPRYVWSEADESWRTYSTLPGDYCDTYGLCGPNGYCSITASPVCECLEGFKPKFPKKWNSMDWSQGCERNHSIRCTSNGTNEDGDGFVLLQGLKVPDTEYTLVYKDIDLNKCRAMCLENCSCMAYTNSDIRGGGQGCVMWFHDLIDIKLFPDGGQELYVRLRASDLGAEHTQKRMKIIVGTTIAAALISVTTYSAYRFRKKIAEKSSKIEDNYESYVDDLDLPLLNYSTIMVASNNFSVKNKIGEGGFGPVYLGKLANEQEVAIKRLSKSSIQGFSEFINEVKLIAKLQHRNLVKLIGCCIQGQEKMLVYEYMTNGSLDYFIFDHSKGKLLNWQKRNHIIGGIARGLMYLHQDSRLRIVHRDLKASNILLDHNLNSKISDFGMARLFRGEQNEESTNKIVGTFGYMAPEYVLDGLFSVKSDVYSFGVLLLEIISGKKNRRSHAKQSSLNLIDHTWALWKMGNAFQIIDPNIEDSCIESEVLRFIHIALLCVQHCPEDRPNMTSVVLMLSSEMELDQPKEPGFFTRRKNVEANSCTSYPSSNNEISITLLTGR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01624 829 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 826 - -
Adu03g01624 829 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 40 826 - -
Adu03g01624 829 Gene3D Phosphorylase Kinase; domain 1 474 589 - -
Adu03g01624 829 ProSiteProfiles Protein kinase domain profile. 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01624 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Adu03g01624 829 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Adu03g01624 829 Gene3D - 27 160 IPR036426 -
Adu03g01624 829 Pfam Protein tyrosine and serine/threonine kinase 516 782 IPR001245 GO:0004672|GO:0006468
Adu03g01624 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 194 IPR036426 -
Adu03g01624 829 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544
Adu03g01624 829 SMART serkin_6 514 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01624 829 CDD STKc_IRAK 520 785 - -
Adu03g01624 829 Pfam PAN-like domain 358 424 IPR003609 -
Adu03g01624 829 SUPERFAMILY Protein kinase-like (PK-like) 500 800 IPR011009 -
Adu03g01624 829 Pfam D-mannose binding lectin 78 189 IPR001480 -
Adu03g01624 829 CDD B_lectin 40 163 IPR001480 -
Adu03g01624 829 Gene3D Transferase(Phosphotransferase) domain 1 590 800 - -
Adu03g01624 829 PIRSF SRK 2 829 IPR024171 GO:0004674
Adu03g01624 829 ProSiteProfiles PAN/Apple domain profile. 352 439 IPR003609 -
Adu03g01624 829 SMART ntp_6 359 438 IPR003609 -
Adu03g01624 829 Pfam Domain of unknown function (DUF3403) 786 829 IPR021820 GO:0004674
Adu03g01624 829 CDD PAN_AP_plant 356 438 - -
Adu03g01624 829 ProSiteProfiles Bulb-type lectin domain profile. 31 157 IPR001480 -
Adu03g01624 829 SMART blect_4 37 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01624 Adu-Chr3 26380282 26388715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01624 455 799 Receptor kinase-like Gene Family AT4G23230 54.441 2.63e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu03g01624 PK_Tyr_Ser-Thr 4.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01624 - - ahf:112733195 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01897 08 31470320 31473383 Adu03g01624 03 26380282 26388715 PCT