Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01622 ATGACGCACGACGCTACCTTTGGTCGTGCTCGAGCCCCTCTCGTCATCACAATCACCAACCCACCGTCTGCCGTGGTCGCCAGCCCAAACCCCTCACTTATAGTCATTCTCAAAGCCTCAAAGCAAACTCTAGATTCGCCAATCGCCTGTTCTGCCGCTGTTTGCTCGTGGTCCGTCGTGGTGGTCATCCCTAGGTTCCCATCATCCATCGAATTCAACAGCTCTTCCTCAAATTCTGTTCACTTTACTCACTTAGCAAAACACTCTTACCTCTCATCGGGCTCGAGCCCCTCTCGTCATCACAAATCACTAGCTTCTTCCTCGTGGTCGTGGAAGTGTCATCTGTCGGAAGCCCCTCTCCTCTGCGCATCAGTTGCCACCCCACCGTCCGTCGTGATTGTCAACCCAAACCCCTCAAACCCTCGATTCACCAATCGCCTTGTTCTGCCGCTGTTTAGCACACCGTCCGTCGTGGTTGCCCGCCGAAACCCCTCAAACCCTCGATTCGCCAATAGCTTTGTTCTACCACCCGTGATCCGTCGTGGTAGTCATCGCAAGGTTGTCGTCGTGGTGGTCATCGCTAGGTTTTCGTCATCCATCGCATTCAACTGCTCTTCTTCAAATTCTGTTCACTTTACTCACTTAGCAAAGCCCCTCTCCTATGTTCATCAGTTGTCAGCACACCATCCGTTACCAGTCCAAACACCTCAAACCCTCGATTCACCAATCGCCTTGTTCTGCGGCTATTTGTTCGTGGTCTGTCGCGGTGGTCATCGCAAGGTTGCCGTGGTCATCGCTAGAGCTGATGAATTAAGTGCTGTTGAGCTTGATAATCTGATGACTGTGGTTGCCAACCCAAGGCAATTCAAGATCTCAGACTGGTTCCTCAAGGATGGCAAGTACTCCCAGGTTGTGTCCAACGCCCTCGACATGAAGCTCAGGGATGACTTAGAGAGACTCAAGAAAATCATGTCTCACTCATAA 984 0.5163 MTHDATFGRARAPLVITITNPPSAVVASPNPSLIVILKASKQTLDSPIACSAAVCSWSVVVVIPRFPSSIEFNSSSSNSVHFTHLAKHSYLSSGSSPSRHHKSLASSSWSWKCHLSEAPLLCASVATPPSVVIVNPNPSNPRFTNRLVLPLFSTPSVVVARRNPSNPRFANSFVLPPVIRRGSHRKVVVVVVIARFSSSIAFNCSSSNSVHFTHLAKPLSYVHQLSAHHPLPVQTPQTLDSPIALFCGYLFVVCRGGHRKVAVVIARADELSAVELDNLMTVVANPRQFKISDWFLKDGKYSQVVSNALDMKLRDDLERLKKIMSHS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01622 327 Pfam Ribosomal protein S13/S18 266 326 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu03g01622 327 Gene3D 30s ribosomal protein s13, domain 2 298 327 IPR027437 -
Adu03g01622 327 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 270 323 - -
Adu03g01622 327 PANTHER 40S RIBOSOMAL PROTEIN S18-RELATED 270 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01622 Adu-Chr3 26348153 26353604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01622 267 326 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 80.303 7.51e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01622 K02964 - thj:104813090 104.375