Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01616 ATGGATTCATCACATCTTCTCGGTTACAGTGTGACTAATTCTAGCTTACTCAGCAAATCATCTTTTCCAACTACACCTCCGTTATCCCACCTGCTACTTGGACCTTTGAATGAAGCAGTAAACTCACCTAATTTGTCTCTTTCTACTCACTTCAACTCTGATACTGATTCTGCATTGAATGATAGTCAGCAGTTAGTTGAAGTTACGCGTGCAGAGAAACGTCACAAATCAATGGAGGAAGCGTCGCTACAGAGCATTCCATCGAGCACTTTGAAACAATTGCTCATTTTATGCGCCAAAGCAATGTCTGAAAACAAGATGAAAGATTTTGATCAATTGATAGACAAGGCTAGAAGTGCTGTGTCTATCAGCGGGGAGCCAATTCAGCGGCTCGGTGCTTATTTAGTGGAAGGGCTTGTTGCAAGGAAGGAGAAATCGGGTAACAACATCTATCATGCTCTTAGGTGCAAGCAGCCTGCAGGTACAGAGTTACTATCATACATGCAGATGTTATATGAAATTTGTCCATACTTCAAGTTTGGTTACATGGCTGCCAATGGAGCTATTGCTGAAGCATGCCGAAATGAGGATCGAATTCACATCATAGATTTTCAGATTGCACAGGGAACTCAATGGACGACTCTCCTTCAAGCTCTTGCAGCAAGGCCTAGTGGGGCTCCACATGTGCGGATCACCGGGATTGATGATCCTGTTTCTAAATATGCTCGAGGAGAGGAATTGGAGGCAGTTGGTGAAAGTTTGTCGAAAATATCTAAGAAATTTGACATTGAGGTTGAGTTTCATGGAATTCCTGTCTTTGCCCCAGATGTAACCAGGGATATGCTTGATGTCCGGCCTGGAGAGGCCTTGGCCGTTAACTTTCCTCTTCAACTCCATCATACGGCCGATGAGAGTGTCGATGTGACTAATCCAAGGGACGAACTTCTGAGATTGGTTAAGTCTCTTTCTCCTAAGGTAACCACATTGGTGGAGCAGGAATCGAACACAAACACGACGCATTTCTTCAACAGGTTCATAGAAACACTTGATTACTACTTGGCCATGTTCGAGTCCATCGATGTTGCCCTCCCAAGAACGAGCAAGGAGCGGATCAACGTGGAACAACATTGTTTAGCTCGAGATATTGTGAACATTGTTTCTTGTGAAGGGAAGGAAAGGGTGGAGCGGCATGAACTGTTTGGTAAGTGGAGGTCCAGGTTCACAATGGCAGGTTTTGTTCAATATCCTTTGAGCTCTTATGTGAATTCCATTATAAGAAACCTCTTGAATCGCTATTCGGAGAATTATAGTCTGGTGGAGAAGGATGGAGCCATGCTGTTGGCATGGAAGAACAGAAATTTGATATCAGCTTCAGCCTGGTATTAA 1386 0.4387 MDSSHLLGYSVTNSSLLSKSSFPTTPPLSHLLLGPLNEAVNSPNLSLSTHFNSDTDSALNDSQQLVEVTRAEKRHKSMEEASLQSIPSSTLKQLLILCAKAMSENKMKDFDQLIDKARSAVSISGEPIQRLGAYLVEGLVARKEKSGNNIYHALRCKQPAGTELLSYMQMLYEICPYFKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWTTLLQALAARPSGAPHVRITGIDDPVSKYARGEELEAVGESLSKISKKFDIEVEFHGIPVFAPDVTRDMLDVRPGEALAVNFPLQLHHTADESVDVTNPRDELLRLVKSLSPKVTTLVEQESNTNTTHFFNRFIETLDYYLAMFESIDVALPRTSKERINVEQHCLARDIVNIVSCEGKERVERHELFGKWRSRFTMAGFVQYPLSSYVNSIIRNLLNRYSENYSLVEKDGAMLLAWKNRNLISASAWY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01616 461 Pfam GRAS domain family 91 460 IPR005202 -
Adu03g01616 461 ProSiteProfiles GRAS family profile. 82 461 IPR005202 -
Adu03g01616 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 460 IPR005202 -
Adu03g01616 461 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 57 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01616 Adu-Chr3 26049946 26053606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01616 81 460 GRAS Transcription Factor Family AT5G48150 62.992 2.30e-176 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu03g01616 GRAS 4.1e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01616 - - adu:107478273 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01616 03 26049946 26053606 Adu03g01616 03 26049946 26053606 ECH
Adu08g01864 08 30667739 30670991 Adu03g01616 03 26049946 26053606 PCT