Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01606 ATGATGGGACAGGATCAGTGTATGGTTGTGGGTACAAGTATGGCTGTGGGTATGGGTACGAGAAGGGTTGTGATGGGTACTAGTATGGAAATGGATGTGGGCAATTGCCCTTCTCTCTCTCAGCCACCACTTGCAATAGCAGCCACCGCCTCTGCTGTCGCCAAACTCTTCTCGTCAGCCAGAGAGTGCCTCACTGCCGGCAATGACGATAGAAGGTTAGCTCGAAGCTCTTGGCCGTCGATCCTCTTCTCCTCCACGTCATTACCTTTGGACTTGCAAGCTTCTTCATGGTCGTCTTCTCTAAATCGTATTCATCTTCATCTTCGTCGTCGTCTTCGTCGTCGTGGACTTGCAAATCAAAGTGTGGTCGGTTGGATTCCTCCATCGCTGGTCAGTTTTCTCGATCCTCATCTCTGTCTCGCCGTTCCTCCCTTGCCGGTAGTTGAATTTGTTCCTTCCTCACTGCCTGTTTCGTTTCTCTGTCGACGTCATTTTGGTTCTTCCATCGGCGGCAAAGCCCCCAAGGGAGTGGTTACGTCCAGGAAAGGAAGACATGACGAGGGTCCTAGCCTCTTTGTCTGGTTAAAAGGACCCACAGTGCGGGTTCTCTGCTTCGGAGGTTTCCCTGCCGCTACTTATTTTTTCGCCAGCATGGTTCTGCAGAACGATATCGATTTGCTTAATCCACCGGCTGAGCTTGAGAAGAGAAAGCACAAGCTCAAGCGTCTTGTTCAGTCTCCTAATTCTTTCTTCATGGATGTGAAATGCCAAGGTTGCTTCAACATTACGACTGTATTCAGCCACTCTCAGACAGTCGTGGTGTGTGGAAACTGCCAAACGGTCTTGTGCCAACCTACAGGTGGAAAAGCAAGGCTAACGGAGGGCTGCTCGTTTAGGAAGAAGGGAGACTAA 912 0.5033 MMGQDQCMVVGTSMAVGMGTRRVVMGTSMEMDVGNCPSLSQPPLAIAATASAVAKLFSSARECLTAGNDDRRLARSSWPSILFSSTSLPLDLQASSWSSSLNRIHLHLRRRLRRRGLANQSVVGWIPPSLVSFLDPHLCLAVPPLPVVEFVPSSLPVSFLCRRHFGSSIGGKAPKGVVTSRKGRHDEGPSLFVWLKGPTVRVLCFGGFPAATYFFASMVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLTEGCSFRKKGD 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01606 303 Gene3D - 222 302 IPR023407 -
Adu03g01606 303 SUPERFAMILY Zn-binding ribosomal proteins 247 301 IPR011332 GO:0006412
Adu03g01606 303 PANTHER 40S RIBOSOMAL PROTEIN S27 187 302 IPR000592 GO:0003735|GO:0005840|GO:0006412
Adu03g01606 303 Pfam Ribosomal protein S27 247 301 IPR000592 GO:0003735|GO:0005840|GO:0006412
Adu03g01606 303 Hamap 30S ribosomal protein S27e [rps27e]. 241 301 IPR000592 GO:0003735|GO:0005840|GO:0006412
Adu03g01606 303 ProSitePatterns Ribosomal protein S27e signature. 255 287 IPR000592 GO:0003735|GO:0005840|GO:0006412
Adu03g01606 303 PANTHER 40S RIBOSOMAL PROTEIN S27-RELATED 187 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01606 Adu-Chr3 25768741 25780013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01606 218 303 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 96.512 3.42e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01606 K02978 - minc:123230388 180.644