Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01550 ATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACTATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATAAACATGCTAAAGTCAGGGATCAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTAACGATTCAAGAGCACACATGCGCTTTAACGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCCGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCCAGAGATGGATCAATGCGGGTTCTAAACATAGATAATACTGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTACGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTTATGTGTACCTGTTTACGAATGGAGTCATTTGGTATTCCCTGCGAACATATTGTAAAAGTAATGGTTGACAGAGACATCTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCTTTGGTAGAATTTTCTAAACAACTGGCTGCTGTTGCTGCTAAAGTACCAAAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTACTCATCTTACAAGGTTGCAGACGAAGGAGATAATCAACCTCACTCAGGTGTAGCTAGAAGTAGCAATCCGTATGTGCATCCAACCACTGGAGGCTCAGAACAACCATCTAAGAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATAGAAAATGAAGCTATCGGTTCGGACGATGGCGACATGTGTACCGAAGCGACGGCTGAGTTAGATAGTGATAGTTAG 1278 0.4155 MEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNYDLLDTQFSAMLPAHRKMSEADIMQMINMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACNDSRAHMRFNEFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLFFRPFLSRDGSMRVLNIDNTDDCIKYIVCKHGRPDFTWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKVMVDRDICEIPRSLVLDRWTKKVKSALNDPSGFTRDAVVISRQSALVEFSKQLAAVAAKVPKRYEETRDLIMGLYSSYKVADEGDNQPHSGVARSSNPYVHPTTGGSEQPSKKKKRQRCSVCQMEGHKKTTCPWQKDIDNNVIENEAIGSDDGDMCTEATAELDSDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01550 425 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 151 326 IPR031052 GO:0006355
Adu03g01550 425 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 148 IPR031052 GO:0006355
Adu03g01550 425 MobiDBLite consensus disorder prediction 404 425 - -
Adu03g01550 425 ProSiteProfiles Zinc finger SWIM-type profile. 226 264 IPR007527 GO:0008270
Adu03g01550 425 PANTHER OS03G0181600 PROTEIN 151 326 - -
Adu03g01550 425 PANTHER OS03G0181600 PROTEIN 8 148 - -
Adu03g01550 425 Pfam FAR1 DNA-binding domain 7 51 IPR004330 -
Adu03g01550 425 MobiDBLite consensus disorder prediction 343 377 - -
Adu03g01550 425 MobiDBLite consensus disorder prediction 347 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01550 Adu-Chr3 24455835 24457771 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g01550 FAR1 2.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01550 - - adu:107458210 551.977