Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01541 ATGCTTGGATCTCGTGCCTGGCGGTTGCATGGCCCTCAACTTGAAATGGTTGAGGCTACAAAACAAAACATGGAGGAGACACAAGAAGATGCAGGGCAGGCAACGCAAAGGCCATCCAGCATGTCAGCGTGGCCTTCAGATTTTGCTGGAAAATTTGGATCTGTTTCTTTGGATTCTCAAGAAACCTTAAATGATAGTGACTCACATAGACATTCTAATGAAGATGTCATGTCACCACATAAAGCATCACAGATTCTCTGGCACACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTCAATAAATATTTCGATGATATTCCTACTTTGGATGAGCTTCAGGCTTTGAGTATAGATGGTTTTAAGGCTGATATCATTCTTGTGGACACAGAGAAAGATAGAAAGTTATCCATGTTGAAGCAACTAATTGTGACATTGGTCAAAGGATTGAACTCAAATCCAGCTGCAACGATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGACCAAATGCAGAAAGTCCCGCAAAAGCTGCACTAGAGGAGCCCTCCCATGTGTTTGAAAATTGTGGTGTCCAGTTGCTGGGGCAGATAAGGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGACACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTCCCAAATGATGAAGCTGCTGAATGTATAGACTCTTACAAGCATATGTCTGTGATGGTTGTATTAAATTCTGTGGAGCTGCTGGTTGATCTCATGCGTTTTCCTGGCCAATTGTTACCACGATCAACCAAGTCAATTTTTATGACACATATATCTGCAGCAGGAGAGAGTGATTCAGCCGAAAATGATTCTTGTGATTCACCATTGGAACCAAACAGTCCTTTGTATGGGGTTTCAGAGAGGTTAGATCCTGAGAAGGAAAACTTTCAGTTCCGAAGAAAATTTGAAGGGTCTTCAAATGTGTCAGGCCTCTCCTTGAGAAATTTGATGTTACGATATCCCAGTCTTGAAAGGAAAATGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCATAGTAGGAGAAAGGTCATTGCTGAACAGAGGACTGCAAATTCAAGTCCAGAACATCAATCATTTCGAGCACACCGGCGATCCATGCTTAGCGGTGATAGGTTAGGATTTAGAGATTTTGCTGATGACCAGAGCACATCAAGATCCAGCTATAGGTCAGATGGTGCATCATCTTCACAAGTTCGCAGGATACGAAGAAGTGTCAGTGTTACTCCTGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAGCACTTAAGCAAACTCGTCGTCTAAGAGAACATGGGGATCATAGTTCTTTGTCCAATTCTCTGAATGATAGAACGAGTGGTCCAGATCTTCAGAGAAATCTGTCAAATTTCCATGGTCATGGTGACAGTTCTCAGAAAGCAATGTCATTACCGTCTTCACCGCATGACTATAGAGGACAAGCACCTGAGAGAGGTGGGCCATCTGGATATGGAGTGAATGCTAAACTGGAGTTGACTTGGAATAAAGTTCTCGAATCACAAATGTTCAACAATAAACCTCTGTTACCATTTGAAGAATGGAATATTGACTTCTCGGAATTAACCGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGCGAGGTTTTCCGTGGCATGTGGAACGGCACAAATGTTGCAATCAAGGTTTTTCTTGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAGATAAGCATTCTCAGGTATTTTGTGATTAAATTTTATGCAGTTATTCTGTTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACGGAATATATGGAGGTGGGATCTTTGTATTTCTTGCTTCATATGAGTGATCAAAAGAAGAAGCTTAACTGGAAGAAAAGGTTAAAGATGTTGCGTGGCATATGCCGGGGCTTGATGCACATCCATCGTATGAAGATTATTCACCGTGATGTAAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTCTCAAGAATAGTGACAGAGACTCCCATGAGAGATTCTTCGTCAGCCGGAACTCCAGAGTGGATGGCTCCTGAACTCATTCGAAATGAACCATTCACTGAAAAATGTGACATCTTTAGTCTTGGGGTGATAATGTGGGAGCTCTGCACCTTGAGTAGGCCTTGGGAAGGTGTACCGCCAGAGAGGGTTGTTTATGCTGTAGCTCATGAGGGTTCCAGATTGGAACTTCCTGAAGGCCCAATGGGCAGGCTGATATCAGATTGTTGGGCAGAACCGCATGAGCGACCAAGTTGCGAGGAGATCCTCTCTCGTTTGgttggactggatcggaatccgaccggtttacagaaaacaacctcgtttccttccttgaaaggaaagaagttgcacgcgttatcccccattccccccttctccaactccttccTTCGGCAAACCCTAACCTCCACCAATAGTTGTCGCCGTCTGTTGGATGAGAGACTGCTGCCGCCGTCTATCCCACTCAAGAACTCCCGTCTTCGTGCTCTCGGGCCTCTCGCCGGATCCTCCACGTCGGGTGCTCGCATCTCGCCGTTCTCCTCTGTGCTCGGCTGCTCGCGCCTCCCTCCGCCAGTGAGTGCTCGAGCTGTGCGTGTTGGTTGCTGCTCGTCGTCCGTGGTTGTCTCTGCTCGATTCTGCCTCCCAGTCTCACTCGAGTCTCGTCTCAGTCACTGGCATCTCGTGGTTCGTCTGTCTCGTCGCCGGCGGCAGAAGCAACTCGTGGGGTTGTCTCTTGCTTAG 2913 0.4312 MLGSRAWRLHGPQLEMVEATKQNMEETQEDAGQATQRPSSMSAWPSDFAGKFGSVSLDSQETLNDSDSHRHSNEDVMSPHKASQILWHTGMLSEPIPNGFYSVIPEKRLNKYFDDIPTLDELQALSIDGFKADIILVDTEKDRKLSMLKQLIVTLVKGLNSNPAATIKKIAGLVSDFYKRPNAESPAKAALEEPSHVFENCGVQLLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDEAAECIDSYKHMSVMVVLNSVELLVDLMRFPGQLLPRSTKSIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERLDPEKENFQFRRKFEGSSNVSGLSLRNLMLRYPSLERKMSLSHSEPNIATAFGRHSRRKVIAEQRTANSSPEHQSFRAHRRSMLSGDRLGFRDFADDQSTSRSSYRSDGASSSQVRRIRRSVSVTPEIGDDIVRAVRAMNEALKQTRRLREHGDHSSLSNSLNDRTSGPDLQRNLSNFHGHGDSSQKAMSLPSSPHDYRGQAPERGGPSGYGVNAKLELTWNKVLESQMFNNKPLLPFEEWNIDFSELTVGTRVGIGFFGEVFRGMWNGTNVAIKVFLEQDLTAENMEDFCNEISILRYFVIKFYAVILFLGACTKPPRLSMVTEYMEVGSLYFLLHMSDQKKKLNWKKRLKMLRGICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTETPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVAHEGSRLELPEGPMGRLISDCWAEPHERPSCEEILSRLVGLDRNPTGLQKTTSFPSLKGKKLHALSPIPPFSNSFLRQTLTSTNSCRRLLDERLLPPSIPLKNSRLRALGPLAGSSTSGARISPFSSVLGCSRLPPPVSARAVRVGCCSSSVVVSARFCLPVSLESRLSHWHLVVRLSRRRRQKQLVGLSLA 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01541 970 MobiDBLite consensus disorder prediction 407 436 - -
Adu03g01541 970 Pfam Ethylene-responsive protein kinase Le-CTR1 81 275 - -
Adu03g01541 970 MobiDBLite consensus disorder prediction 381 400 - -
Adu03g01541 970 MobiDBLite consensus disorder prediction 294 316 - -
Adu03g01541 970 Coils Coil 17 37 - -
Adu03g01541 970 MobiDBLite consensus disorder prediction 26 43 - -
Adu03g01541 970 ProSitePatterns Protein kinases ATP-binding region signature. 572 593 IPR017441 GO:0005524
Adu03g01541 970 MobiDBLite consensus disorder prediction 23 43 - -
Adu03g01541 970 CDD STKc_MAP3K-like 572 816 - -
Adu03g01541 970 MobiDBLite consensus disorder prediction 477 510 - -
Adu03g01541 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Adu03g01541 970 ProSiteProfiles Protein kinase domain profile. 566 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01541 970 MobiDBLite consensus disorder prediction 414 436 - -
Adu03g01541 970 SUPERFAMILY Protein kinase-like (PK-like) 552 849 IPR011009 -
Adu03g01541 970 Gene3D Phosphorylase Kinase; domain 1 559 646 - -
Adu03g01541 970 MobiDBLite consensus disorder prediction 464 528 - -
Adu03g01541 970 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 49 820 - -
Adu03g01541 970 Gene3D Transferase(Phosphotransferase) domain 1 647 840 - -
Adu03g01541 970 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 49 820 - -
Adu03g01541 970 SMART serkin_6 566 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g01541 970 Pfam Protein tyrosine and serine/threonine kinase 567 816 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01541 Adu-Chr3 24247466 24264905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01541 24 817 MAP Kinase Kinase Kinase AT3G58640 66.176 0.0 1076
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Adu03g01541 PK_Tyr_Ser-Thr 2.8e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01541 - - gmx:100806527 1255.74