Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01523 ATGACTGGACCAAAAGAGATCACAAAGAAAAGCCAAGGAGCAAAACGTGGTATTGTTCTTTACTCAAATCCAGAACCAGAGAGTTGCAGTAACAATCTTCATAAACTCTGGGCCCTTCTCAATTTTCTTCTGCCTGAAATTTTTAGCTCTGCTGAAACTTTTGATGAATGGTTCCAAATATCAAAGCGTGATTCTTGGGTCCTGATATTTTCACAGATGACTAGGCTGCTGGACATACTTGAAGATTATTTAATGTTTCAGGGATATCAATATTGTCGTATAGATGGAAACACCCGTGGAGAAGATCGTGATGCTTCCATTGAAGCTTTCAACAAACCAGGAAGTGAGAAATTTGTCTTCTTGTTATCTACTAGGGCTGGAGGTCTCGGCATCTATCATGGTTGTAGCAGTTTGCAGCCAATAAGAGACACTAGAGAGAAGCAGGTACAAATGTGGAAGGATCTTATTCTAGATTATTGTAGAACACAAAGTGCAGGGTCTCTTACTTATGAAGCTAGAGAAGCATTTCTTTTAGCCTTAGTAGCTGATGGACGTGCTGAGTGGATGGATAAAGGACATAGGAAATGTCTTATTCTCTGGAATCAGATTCAAGAGTGGGCAGAAATTTTAGTACAATTTGCAAGAGATAATGGGCTGGAAGATGGTGTTGTGACGATGGAAGAAATAAGGTTTGGGACTGAATCTCAAGGAACAGCAAGACCATGGAGCAAAAGAAATAAGTACAAGTTTTCTGATTTGCACGGAGAAATGGATGTGGATCCTTCGATGTTCCCACGTGAATTGATGACAATCCAAAGAATTGCAATTGGGTCTCCTGGAGAGGCTGCTCAGCCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCAATGCTTATTTTTTATTTTGCTGCTGAAGGCTCTGGCTTGTCAAACAAAGCACCATAA 948 0.404 MTGPKEITKKSQGAKRGIVLYSNPEPESCSNNLHKLWALLNFLLPEIFSSAETFDEWFQISKRDSWVLIFSQMTRLLDILEDYLMFQGYQYCRIDGNTRGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGIYHGCSSLQPIRDTREKQVQMWKDLILDYCRTQSAGSLTYEAREAFLLALVADGRAEWMDKGHRKCLILWNQIQEWAEILVQFARDNGLEDGVVTMEEIRFGTESQGTARPWSKRNKYKFSDLHGEMDVDPSMFPRELMTIQRIAIGSPGEAAQPDAIRAAFAEFFSMLIFYFAAEGSGLSNKAP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01523 315 Gene3D - 46 132 IPR027417 -
Adu03g01523 315 Pfam ESCRT-II complex subunit 168 238 IPR008570 GO:0000814|GO:0071985
Adu03g01523 315 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR17 62 133 - -
Adu03g01523 315 SUPERFAMILY "Winged helix" DNA-binding domain 137 206 IPR036390 -
Adu03g01523 315 Gene3D - 198 259 IPR036388 -
Adu03g01523 315 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR17 30 61 - -
Adu03g01523 315 Pfam Helicase conserved C-terminal domain 60 131 IPR001650 -
Adu03g01523 315 Gene3D - 136 175 IPR014041 -
Adu03g01523 315 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 53 237 IPR001650 -
Adu03g01523 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 131 IPR027417 -
Adu03g01523 315 CDD SF2_C_SNF 35 131 - -
Adu03g01523 315 PANTHER SNF2/RAD54 HELICASE FAMILY 62 133 - -
Adu03g01523 315 PANTHER SNF2/RAD54 HELICASE FAMILY 30 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01523 Adu-Chr3 23845174 23848275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01523 269 311 Major Intrinsic Protein MIP AT4G01470 74.419 1.32e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01523 K12189 - gmx:100803388 170.244