Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01520 ATGCGTCCACCAGTTAGGAGTAGGGTCAGGTTTCAAATAGGGCAGAAAGTGGAGGTGTGTGGTAAAGAAGAAGGGTTTTTTGGTTCTTATTATGAAGCCACCATTGTTTCATGCGTTGGTAATAGCTGCTACCTTGTCCAATATAAAAACCTTCTAAGTGCTACTGAGCCTAATAAGCCTCTCGTTGAGATGGTGAAACTTAAGGACCTTCGCCCTATTCCATCCGAAGATCTTGGATCTCATGAATTCATTGTTAATCAAAATGTTGATGTATTTGACAATGATGGTTGGTGGGTTGGAAAAATTACCAGTAAGAGGGGTTCCAGATATTCTGTGTATTTTTCCTCCACAAATGAAGAGATTGTTTATCCTTCTTCCCAAATTAGGGTTCACGTAGATTGGATTGATGGGTCGTGGGTATATCAGGATGGAAATCAACAATGA 444 0.4032 MRPPVRSRVRFQIGQKVEVCGKEEGFFGSYYEATIVSCVGNSCYLVQYKNLLSATEPNKPLVEMVKLKDLRPIPSEDLGSHEFIVNQNVDVFDNDGWWVGKITSKRGSRYSVYFSSTNEEIVYPSSQIRVHVDWIDGSWVYQDGNQQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01520 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 143 - -
Adu03g01520 147 Gene3D - 1 82 - -
Adu03g01520 147 PANTHER - 8 143 - -
Adu03g01520 147 Pfam Agenet domain 14 74 IPR008395 -
Adu03g01520 147 Pfam Agenet domain 87 129 IPR008395 -
Adu03g01520 147 SMART agenet_At_2 81 136 IPR014002 -
Adu03g01520 147 SMART agenet_At_2 9 78 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01520 Adu-Chr3 23755780 23756235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01520 23 143 PHD Transcription Factor Family AT5G58610 28.000 2.54e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01520 - - adu:107478234 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01520 03 23755780 23756235 Adu03g01520 03 23755780 23756235 ECH