Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01516 ATGCAACAACTATGGCGTGGGTTCAGCACAAATGGGTTGTTTGTGAATCGAGTTGTACTCGGTTCTCTTCTCTTGGTGTGGGTCAGGTTTTGCAATATTGAACAGTTACACGTTTCCTCTCCTCTCACCATATTTTCTCTCACTTTCGGTGGACCTTCCCCACAACGAAGCCAACCATCACCGCACACCCACAGCCGACGTCGCCTCCCTTTGTGCCAACGTCCGACTAGCCCTCCAAGCAATGAAAAATTTTTTCCCCACAACACGTGCACCGTGCAGCCCACCGTAGCCATTTCAATAGAGGCCAATTCTGTCGAACCTATTTGTCTCGCACCAGCTTCTTTCACCGACAACATTACCACGCATTCAATCGACAACCTTCTCAATTCATTCGACGGGGAAGGTGAACAATCTAACAAGGCTATAGAATGTACGGACATTACTGAGTTGGGATGTGATGACACGGATCTTGTTGATGAGTTATCAGATCGTAGTTGCCTTGCTCAAGATGAAATACCAAGAGTTGGAATGTGGTTTGAGCATTTGAAGCTGGCCCAGGATTTTTATGCGAGCTACGCAAAGAAAGTTGGCTTCATAAGTAAGATATGGGTCACAAATTTTGACAGGATGACAAAGCAATTGATCAACCAATCTATTCATTGCAATCGGGAGGGTTTCCGCGGGTCTCGTGTCAAAGCACCCACACAAAAGAACACAATTGCAGCTGTGGGGTGCAGAGCAAGAATATATGCAAAGTTTGACAGGGAAAAGCAAGAtcgggtcttgttgaagTTGGATGTTTTTAAATGTGGTTGTTCTTCCTTAATGCCGTTCGCCGCTTTCATCGGTGTGAACCACCATGGCAAGTCTACTTTGCTAGGCTGTGCTCTGCTAGGCAGCGAGGAGATCCCGATTTTTGAGTGGGTGTTCACACAATGGCTAAAATGCATGGAAACTGTACTGCAGGGCATCATCACAGACCAATGCAAGTCTATGTTTGGCGCAATTAAGAAGGTCCTCCCCAATACACGCCACCATTGA 1041 0.4573 MQQLWRGFSTNGLFVNRVVLGSLLLVWVRFCNIEQLHVSSPLTIFSLTFGGPSPQRSQPSPHTHSRRRLPLCQRPTSPPSNEKFFPHNTCTVQPTVAISIEANSVEPICLAPASFTDNITTHSIDNLLNSFDGEGEQSNKAIECTDITELGCDDTDLVDELSDRSCLAQDEIPRVGMWFEHLKLAQDFYASYAKKVGFISKIWVTNFDRMTKQLINQSIHCNREGFRGSRVKAPTQKNTIAAVGCRARIYAKFDREKQDRVLLKLDVFKCGCSSLMPFAAFIGVNHHGKSTLLGCALLGSEEIPIFEWVFTQWLKCMETVLQGIITDQCKSMFGAIKKVLPNTRHH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01516 346 PANTHER OS03G0843700 PROTEIN 275 345 - -
Adu03g01516 346 PANTHER OS03G0843700 PROTEIN 156 252 - -
Adu03g01516 346 MobiDBLite consensus disorder prediction 53 85 - -
Adu03g01516 346 Pfam MULE transposase domain 275 345 IPR018289 -
Adu03g01516 346 Pfam FAR1 DNA-binding domain 187 258 IPR004330 -
Adu03g01516 346 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 275 345 IPR031052 GO:0006355
Adu03g01516 346 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 156 252 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01516 Adu-Chr3 23699390 23702580 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g01516 MULE 1.7e-12 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01516 - - ahf:112729978 253.062