Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01474 ATGATGATCCTTCAAAATATGGATCATGGAGAACTCTCTAACGCTTTCCCTCATCATCAGAATCAGAATCCAACTACTACTCCTCCTCCTTCTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGATCCGGAAGCGGAAGTAATAGCCTTATCCCCAAAGACACTAATGGCTACAAACAGGTTCTTGTGTGAAACCTGTGGGAAGGGTTTCCAAAGGGATCAAAACCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTAAAACAAAGAACAAATAAAGAACCAAAGAAGCGTGTATACGTGTGTCCGGAGAAAACATGTGTCCACAACCACCCTTCAAGGGCTTTGGGAGACTTGACCGGAATCAAGAAGCACTTTTGCCGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAATGCTCCAAGCGTTACGCGGTTCAGTCCGACTGGAAAGCCCACTCCAAAACCTGTGGTACAAGAGAATATAAGTGTGATTGTGGAACCATCTTTTCACGGAGGGATAGCTTCATAACTCACAGGGCATTTTGTGATGCATTGGCAGAAGAAACAGCTAGGGTAAATGCAGCATCAAGCATAAACAACTCAACATTAGGGGCTAATAATAATAACAATAACATTATTGGTTACAATAACATGATGATAGGAACCTCCATGGCCCCTCATAATAATAATAATAATAATAACATGGCAACCCAATTTGCTTCAATTTGCAATAAGCCAATTCCATTCACTGAAGAAGCCACAAATAACCAAACAACAACAAGAGGATTATCCCTTTGGATGGACCATCATCATCATCATCGTCAAGAAGCAACAATGGCTACTAATAACAATAATTACCATCTGAACTGGGTATTCGGATCCAAAATTTCGACCAATCCAAGCCAAGATCTAAGTAGCAACAACACTATTACTAGTACTACTACTACATCGCTTCCAATACTAGGAAGCATTGTTAATGTTCCTTCATTGTATAGCTCACAACATCAACCCCATCAAACATGTGCTTCTTCGTCGTCGGCGAACATGTCGGCGACGGCATTGTTGCAGAAAGCAGCTCAAGTTGGTGCAACCTCAAGTGATCCATCATCATTCTTGGGGGCATTAGGGTTGAAATGCAGCAATGGTAGTGATCAAGGGCAAGATGGGAATAACAATAAGTTTTGTGGGGTGTATGGTTCAAGTTTGGTGCTAACAAGTAGTAGTAATAATATTAATAGAGAGGCAGAGAAGAATGAATTGTCACAAATGCACCCTTCAAAGAGGAGACATGTAATGCCGAATGAGGAGAGTGGAGGAGGGCAAACTAGGGATTTCCTTGGTGTTGGGGGTGCAAACCACCATTTGCCACCCTTTATCAACCAAAGCTTGGATTTGATTTGA 1413 0.4239 MMILQNMDHGELSNAFPHHQNQNPTTTPPPSLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEPKKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSINNSTLGANNNNNNIIGYNNMMIGTSMAPHNNNNNNNMATQFASICNKPIPFTEEATNNQTTTRGLSLWMDHHHHHRQEATMATNNNNYHLNWVFGSKISTNPSQDLSSNNTITSTTTTSLPILGSIVNVPSLYSSQHQPHQTCASSSSANMSATALLQKAAQVGATSSDPSSFLGALGLKCSNGSDQGQDGNNNKFCGVYGSSLVLTSSSNNINREAEKNELSQMHPSKRRHVMPNEESGGGQTRDFLGVGGANHHLPPFINQSLDLI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01474 470 PANTHER F-BOX ASSOCIATED PROTEIN 32 469 - -
Adu03g01474 470 MobiDBLite consensus disorder prediction 1 46 - -
Adu03g01474 470 Gene3D Classic Zinc Finger 131 198 - -
Adu03g01474 470 Gene3D Classic Zinc Finger 41 115 - -
Adu03g01474 470 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Adu03g01474 470 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 32 469 - -
Adu03g01474 470 MobiDBLite consensus disorder prediction 421 438 - -
Adu03g01474 470 SUPERFAMILY beta-beta-alpha zinc fingers 61 158 IPR036236 -
Adu03g01474 470 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 84 IPR013087 -
Adu03g01474 470 MobiDBLite consensus disorder prediction 421 448 - -
Adu03g01474 470 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01474 Adu-Chr3 22326182 22329034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01474 29 453 IDZ Gene Family AT1G03840 52.146 8.47e-140 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g01474 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01474 K25870 - ahf:112767274 781.941