Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01470 ATGGAGGGTGGTGGTTCAGAAGAAGAGAAGAGGAAGGAGAAGCCAGCGGAGGTTGAGAACAAGATCAAGCGCAGAATGAAGACTGCTTTTCAGTTGGAAGTTCTGGAGAAAACTTATGTTGGAGAGGCTTACCCTTCAGAAGCAGTGCGAGCTGAGTTATCTGCGAAGCTGGGTCTGTCTGATCGTCAACTGCAAATGTGGTTTTGTCACCGGAGGCTGAAGGATAGGAAATCAGCACCAACAGCGAAGAAGCCCCGAAATGATCACCCGCCTGTGGCACGGGATTCAGTGCCCGTAGGAGAGGGTCTTGAGCAAATGGCAGTGGCTGATGCCATGCATGATTGTGGTTTAGCTTCTGGGTTGAAGCCATTTGGATATTCGGATCCAAGGCAAGTTGTTCCAAATCCTTCGATTTCCTTTCCTAGAAGAGGAGCTGGATTGCCAACAATGGAGAACAATAGTTACTATGAACCACATCAGGCCATCGAGGTGCTGCGAGCAATTACGTTTGTGGAGAGACAGTTGGGTCAGCCATTAAGAGAGGATGGACCAATTCTGGGAATGGAATTTCATTCCTTACCCCCAGGGGCATTTGGTGCCCCAATAGAGGAAGTGACATTGGGACAGCATAGGCATTCTGGAAGCCCTTTCGAGGCAAAAATTTATGATCAACGAAACAAGGGCATTCCAAGGACTCTCCACGAGTATCAGTTTATTCCAGAGCAGCTAACTGTTAGAAATGAGACATTTGACAGAGTTGCCCCCACTATCCATTACAGTTCTCCTGATGGCATTTCACATTCCAGGACTTCACTACCTAGCCAGAAATCTTTGCTTGGTGGGAATGAATCTACACCATATGGATATGGAGTTCAAGATCAGATGCCTGCTTTGAATCATTTGTCTCAGCATGTCAGGCAGAATCATGTTTTGCCTTTTGCTTCTGGACAGATTGAGGGTATTCCACGAAAGAACACATTTGTTGATGTAACAGTTGTTACTCATAGTGGGGTTCACCCAATAACTCTGACTGACACTGCACTAGTGCCATCTGACAACACGGTTATCCATGAGGAGGAACCTTCAAGGTTTCAGAGGAAGCAAATGAATGAAGAAGCTAGAATACGACGTGAACTTGAAGCTCATGAGAAAAGAGTTAGAAAAGAGATTGAAAAACAGGATATTCTAAGGCGAAAGAGGGAAGAGCAAATAAAGAAAGAGATGGAGAGGAATAACCGTGAAAGGCGGAAAGAAGAAGAAAGGTTGTTACGTGAAAGACAGCGAGAGGAGGAGAGGTACCAAAGAGAACAGAGGCGTGATCTGGAGCGTAGGGAGAAGCTTTTACAGAAAGAATCAATGAGAGCTGAGAAACTGAAACAGAAGGAAGAACTACGCAGGGAGAAAGAGGCAGCAAGGATCAAAGCTGCTTATGAGAGAACTCTTGCCCGCAGAATGACCAGAGAATCAATGGGACTTATTGAAGATGAACGTCTGGAACTCATGGAACTAGCTACATTGAAGAAGAGACTTCCTTCGATACTGGCTCTTGATTATGAAACTATGCAAAATCTCGAGTTATATAGAGATGGGCAAACACCATTCCCACCCAAGTTCTTGAATACTTTTGCTGATGTTCTTGGAATATGGTCGTTTACCTTGGATGAACTTATTCAAGCTTTCCATGACTATGATCCAAGGTTGTTAGGTGAAATTCATATTGCTCTTTTGAGATCTATTATGAAAGATATTGAAGATGTTGCAAGAACTCCCTCCACTGGATCAGGAGGTAACCAAAACAATGTTGCCAATTATGGTGGGGGGCATCCTCAAGTAGTTGAAGGGTTTGCTTTGTCAGCTGGATTTGGCCCAAAATTGCAGAGACATAGTGAATTGGTGCATCCTTGTGATAACAATGAGGGTCATGATTGTAAAGACATAATCTCTCATCTGCGCAGTGGAGCTGCAGTAAAAAATGCAGTTGCTATCATGCAAGAGAAGGGATTATCTAAGCCAAGTAGATCAAGACATCACTTGACTCCTGGAACTGTTAAATTTGCTGCATTTCACGTCCTTTCTGTTGAAGGGAGCAATGGCCTCAATATATTGGAAGTTGCAGAGAAAATTCAGAAATCTGGGCTCCGTGATCTTACAACAAGCAAAACTCCAGAGGCTTCTATATCTGCTGCATTGTCTAGAGACACAAAGCTATTTGAAAGGATCGCTCCTTTGACGTATTGTGTACGTCCTGCATATCGAAAGGATCTGTCTGATGCTGAAGCAATTTTTTCAGCTGCCAGGGAAAGAATCAGGGTATTCAAAAGTGGATATATGGATGCTGGTGAAGCAGAAGAGGGGGGAAGAGAAGATGATTCTGAAAATGATGTAGCAGAAGATATTGAAACCGATGATTTAGGAGCTGAAACTAATATAAAAAATGGGGGTTTCAGTTCTGTAGAATTTAATTCAAAAACCGTAATGAGAATTAGAAAGGACACTGGTAAGGTTTCTCAAACACTTGGTTGCTATGACCATGAGAAACTGGATGAGGATATACTGTCAATTGTTTCTGAAGGCATTGATATGCACAAAGGGATTAGTGCCTCTTGTGATATTGCTGTTTGCAGCAATGATGTGTCTAATCCTAATCTTGAAGGTATGGATATTGATGAAAGCATTCCAGATGAGTCGTGGGTACAGGGGTTGATGGAAGGAGAGTACTCTGACCTCAGTGTTGAGGAGCGTCTTAATGCTCTCATTGCTTTGGTTAATGTGGCAATTGAAGGGAACTTAATTCGTGTTACACTTGAGGATCGTCTAGAAGCTGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGCACAGCTGGGTAAACGTCGTATCAAAGAGGACTACTTTGTTAAGATGCATCCTGTATCTAATTTCAGCAACAAGAGTGAATCAAATAGTGCATTTCCATCACTTGAGGGCAAACAGAAGCCATTCCTTTCTGTTGATAACAAGAACGACGAGGCTTTATTAACCCCTCTTGGCCAGTGCAACCAGATCAACGAACTACTGGAAAATCCAAATCATATTGAGAGTTCCTCATTTGAAGTTAGCCACCAGCTCCATCGAAGTTCTGCTAACCAAGATAATTATTCTTTTCAACAATTTGGATTTGCTCCTGAAAAATCAAGGTCAAATATAAAATCTTACATTGGTTACTTGGCAGAACAAACCTACATGTATAGGACATTGCCTCTTGGCTTGGATCGCAGACATAACCGATACTGGCAGTTCATTACATCTGCTTCTCCAAATGATCCTGGTTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGAAATTGATTGATTCTGAAAAGGGATTTGATTCCCTATTGGGTTCGTTGGATGTACGTGGGATCAGGGAGTCACACTTGCATATGATGTTGCAAAGTATCGAGATGGCGTTCAAGGAATCTATTAGAAGGAATGTCCATAATGGTGATGCAAGAATGGAGAATGGGGACACTGTCAAGAGGCTCAAGACAGAAGCTTTTGAAGTGGATACGAACAATTATTGTAGTGATATTCACCATCCTACATCTGTGTGCATCGATAATTCAGATGCTTCAGAGGtctcgacatcttttgcagttcagcttggaagaaatgaagctgaaaacagggatGCTCTTCTGAGATATCAGGACTTTGAGAAATGGATGCTAAATGAATGCCTAAATTCGTCAATATTATGTGCCTTGAAGTTTGGGAAGAGGAGGCGTAGCAAACTGTTGACTGTGTGTGATTCATGTCATGATGTTTATTTCTTTGATAGAATCAAATGCCCTTCCTGCAATAGAACTCTCAATGCTCACGGCAAGGCAAAGATTGACACTGATTATTTTCATGTTTCATCTTATCTTCCTTTGAGAATGAGATTGCTGAAGGTCTTATTGTCAATTGTTGAGGATTCTGTTCCCGAAGAAGCTTTTCACGGTATTTGGACCAACAGTTATAGGAAATCATGGTGTACAAAACTGGATGCTTGCTCATCAACTGAAGACCTCCTGGAGATATTAACTGTATTAGAAAGCGCTATAAAGAGGGAGTATTTGGATTCAAACTATGAAACTACCTCTGAGCTGCTGGGTTCGTTAAATTCTTCTGGATGTCCTCCAACTAATGATTTTGTAGGTGCTGAAAGGATACTTCCATGGGTGCCGTGCACAACAGCTGCGGTGGCTCTGAGACTCATGGAACTCGATGCATGCACCTCTTACACCTTTCAGCAGAAGATGGAGTCTGAAAAGGATAAAAGAATTGGAATTGTTACGAAGCTTCCGACAAAATATGCTTCTGCCAAATCATCCTGCCGTGATAGTGCAATTGAAGAAAGAGGACAAACGTCCCAACAGGGACAAAGATCCCAGCAGGGACAAAGCATGCATAAGGTTAAGCATACTGTTGAAAACATGGTTGGTCTTGGTGCTGGCCTTGCAAGTTACAGCAGAGGACAAAGGTCCCGACAGGGCCGGAGCCATTCTTGTGTGAGTGGGAGATCACAAGGACGGATTCTTAATTCAAGACATGATTCTAGAAAGAGAAGCACGACCTCTAGCAGCATGAAAATAGGAAATTTACTTGGATGGAAAGGGAGACCATGTAGGCATGCAGAACAAAATGTACGTGGTCGTCGGAGTGTTCGAAGTAGGCAGAAACCGGCTGTCAAGGTTGAGAAGGACACTCCAGATGATATCACAGGGTATACAGCTGGTATCTTTATCAATGAAAAGATGAATGGAAGTGAAGTGGAAGCTGCTGCTAGAAGTGCTAGCAGCTCAGAAAAATCGGCCTATGAAAATGATATTTATCAGTCAACAGTTGATGCGGATGAATATCTAATTGATGATAATAATAATGATGGATATGAGGGTGGATTTAGTGGAAAATCTGAGAACTTTGCAGAGGGGAGCAACCGTAATGTGGATGATGATGAAAATGAGGACGTTGATGACAATGATGATGAAGACGGACAAGTTGATGTTGAAGATTATATAAGCCACAAATCAGATACTGACGCCGGAGAAAATGCCGACCAGAACATGGATCCTAATGGAACAGATTCAACTTCATTGGAGTACAGTGATTAA 5142 0.421 MEGGGSEEEKRKEKPAEVENKIKRRMKTAFQLEVLEKTYVGEAYPSEAVRAELSAKLGLSDRQLQMWFCHRRLKDRKSAPTAKKPRNDHPPVARDSVPVGEGLEQMAVADAMHDCGLASGLKPFGYSDPRQVVPNPSISFPRRGAGLPTMENNSYYEPHQAIEVLRAITFVERQLGQPLREDGPILGMEFHSLPPGAFGAPIEEVTLGQHRHSGSPFEAKIYDQRNKGIPRTLHEYQFIPEQLTVRNETFDRVAPTIHYSSPDGISHSRTSLPSQKSLLGGNESTPYGYGVQDQMPALNHLSQHVRQNHVLPFASGQIEGIPRKNTFVDVTVVTHSGVHPITLTDTALVPSDNTVIHEEEPSRFQRKQMNEEARIRRELEAHEKRVRKEIEKQDILRRKREEQIKKEMERNNRERRKEEERLLRERQREEERYQREQRRDLERREKLLQKESMRAEKLKQKEELRREKEAARIKAAYERTLARRMTRESMGLIEDERLELMELATLKKRLPSILALDYETMQNLELYRDGQTPFPPKFLNTFADVLGIWSFTLDELIQAFHDYDPRLLGEIHIALLRSIMKDIEDVARTPSTGSGGNQNNVANYGGGHPQVVEGFALSAGFGPKLQRHSELVHPCDNNEGHDCKDIISHLRSGAAVKNAVAIMQEKGLSKPSRSRHHLTPGTVKFAAFHVLSVEGSNGLNILEVAEKIQKSGLRDLTTSKTPEASISAALSRDTKLFERIAPLTYCVRPAYRKDLSDAEAIFSAARERIRVFKSGYMDAGEAEEGGREDDSENDVAEDIETDDLGAETNIKNGGFSSVEFNSKTVMRIRKDTGKVSQTLGCYDHEKLDEDILSIVSEGIDMHKGISASCDIAVCSNDVSNPNLEGMDIDESIPDESWVQGLMEGEYSDLSVEERLNALIALVNVAIEGNLIRVTLEDRLEAANALKKQMWAEAQLGKRRIKEDYFVKMHPVSNFSNKSESNSAFPSLEGKQKPFLSVDNKNDEALLTPLGQCNQINELLENPNHIESSSFEVSHQLHRSSANQDNYSFQQFGFAPEKSRSNIKSYIGYLAEQTYMYRTLPLGLDRRHNRYWQFITSASPNDPGCGRIFVELHDGCWKLIDSEKGFDSLLGSLDVRGIRESHLHMMLQSIEMAFKESIRRNVHNGDARMENGDTVKRLKTEAFEVDTNNYCSDIHHPTSVCIDNSDASEVSTSFAVQLGRNEAENRDALLRYQDFEKWMLNECLNSSILCALKFGKRRRSKLLTVCDSCHDVYFFDRIKCPSCNRTLNAHGKAKIDTDYFHVSSYLPLRMRLLKVLLSIVEDSVPEEAFHGIWTNSYRKSWCTKLDACSSTEDLLEILTVLESAIKREYLDSNYETTSELLGSLNSSGCPPTNDFVGAERILPWVPCTTAAVALRLMELDACTSYTFQQKMESEKDKRIGIVTKLPTKYASAKSSCRDSAIEERGQTSQQGQRSQQGQSMHKVKHTVENMVGLGAGLASYSRGQRSRQGRSHSCVSGRSQGRILNSRHDSRKRSTTSSSMKIGNLLGWKGRPCRHAEQNVRGRRSVRSRQKPAVKVEKDTPDDITGYTAGIFINEKMNGSEVEAAARSASSSEKSAYENDIYQSTVDADEYLIDDNNNDGYEGGFSGKSENFAEGSNRNVDDDENEDVDDNDDEDGQVDVEDYISHKSDTDAGENADQNMDPNGTDSTSLEYSD 1713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01470 1713 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 894 932 IPR028942 -
Adu03g01470 1713 ProSiteProfiles HARE-type HTH domain profile. 681 750 IPR007759 GO:0006355
Adu03g01470 1713 CDD homeodomain 21 78 IPR001356 GO:0003677
Adu03g01470 1713 MobiDBLite consensus disorder prediction 409 439 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1454 1481 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1679 1693 - -
Adu03g01470 1713 Gene3D - 11 91 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1460 1481 - -
Adu03g01470 1713 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1553 1580 - -
Adu03g01470 1713 Pfam Homeodomain 23 77 IPR001356 GO:0003677
Adu03g01470 1713 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1713 IPR044977 GO:0006357
Adu03g01470 1713 ProSiteProfiles DDT domain profile. 526 585 IPR018501 -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 75 97 - -
Adu03g01470 1713 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1713 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1499 1580 - -
Adu03g01470 1713 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1077 1149 IPR028941 -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1694 1713 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1631 1713 - -
Adu03g01470 1713 Pfam HB1, ASXL, restriction endonuclease HTH domain 681 748 IPR007759 GO:0006355
Adu03g01470 1713 MobiDBLite consensus disorder prediction 75 91 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1659 1678 - -
Adu03g01470 1713 Pfam DDT domain 538 582 IPR018501 -
Adu03g01470 1713 Coils Coil 365 474 - -
Adu03g01470 1713 MobiDBLite consensus disorder prediction 1500 1522 - -
Adu03g01470 1713 SMART HOX_1 20 82 IPR001356 GO:0003677
Adu03g01470 1713 SMART testlast3 517 585 IPR018501 -
Adu03g01470 1713 SUPERFAMILY Homeodomain-like 19 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01470 Adu-Chr3 22278282 22290528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01470 1 1436 Homeobox Transcription Factor Family AT5G44180 45.278 0.0 1140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Adu03g01470 WSD 4.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01470 - - gmx:100797480 1895.17